Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4824 |
Symbol | |
ID | 1041944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5486669 |
End bp | 5489440 |
Gene Length | 2772 bp |
Protein Length | 923 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637148225 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | NP_746929 |
Protein GI | 26991504 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.688381 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTCGGC TTCGGATTGC CTCAGCTCTG ATCGTCAGCT TGCTGACCCT GCTCTGCATG TTTCCGGCTG CGGCCGAACA TGACGGTGGC TGGACCGTTC TGCTCGACGA ACAGGCCAAC CTGCAACTGA GCGATGTGCG CTCCGAGCGC TATCGCAACC AGTTCAGCCC ACTGCCTCTC GCCGACCTTG ATGCTGCCCC GGCTGGACAG GCCTTGTGGC TGCACTATCG TCTGGCACCA GGTGACCAGG AGCAGCTGCT GCGGGTATTT GCCCCGGACC TTTCTGGCCT GGACCTCTAC GCCCTCGAAG GCGAACAACT TCTGCGTCAG CTGCACCACG GGCGCCAGGC CGGCAATGCC AGCCCGACCC TGCGTGGCAG CGACCATGTA TTGCCCCTGC CCAACAGCAG GCAACCGCTG GACATCTACC TGCGCCTGGT CTCAGAGCAC CAGCTGCGTC CGGCCATCAG CCTTGAGCCT GCGGCCGAGG CAGCCTCGGA TCAACGCCAG CCGCTGCTGT TCGGCATGCT GTTCGGCGGC CTGATCATGC TGATCATGCA CAACCTGATC CGCTTCCTCT ACACCCGCTC CAGCACCACC CTGATCCTGG CGCTGTACCA CGGCCTGATG CTGCTCAGCG GCCTGATCCT GCTGAACCTC AGCGGCCCTT GGTGGCATGT GTGGCACAGT GCGCAAACGC CTGCCGCCTA TCTGACGCTG GTCCTGGCCG GCCTGTCCGG GTTGTATTTC ACTCAACATT TCTTTTCGCC GTGCAATTCG CCCCGGCTTA ACCGCCTGCT GCAGGGTGAG ATGCTGATTG TCGGGCTCAG TGGCCTGGTG CTGCTGTTCG TCGATACCCT GCCACTGAAC CTGATGACCT ACGCCCTGAT GGCGCTGGGC AGCGTGAGCA TGCTGCTGGT CAGCAGCTAC CACTGGTACA AGGGTTATGC GCCCGGACGC CTGTTCAGCC TGGCCATGGT GGTGTTCAAC CTCGGAGGCC TGGTACTGCT GCCAGCCCTG CTGGGCCTGA CACGCACCTC GACACCCTGG CTGCTGTGTA TCCTGCTGGG CCTGACCGTG GTCAGTGGCC TGCTCCTCAA CCTGGCGGTC AGTGAACGGC TGCGGCGCAT AAGCGAGGAG CGTTTCAGCG CCAGCCGTGC ACTGGCCGCC AGCGATGCGG AAATCAACGC CAAAGCCGAG TTTCTGGCCA AGATCAGCCA CGAAATCCGC ACCCCGATGA ACGGCGTGCT CGGCATGACT GAACTGCTGC TGGGCACACC GCTGTCGGTG AAGCAACGTG ATTATGTGCA GACCATCCAC AGCGCGGGCA ACGAGCTGCT GACGCTGATC AACGAAATTC TGGACATTTC CAAGCTGGAA TCCCGGCAGA TCGAGCTGGA TGACGTGCAG TTCGACCTTA ACGCGCTGAT CGAGGATTGC CTGAACATCT TCCGCGCCAA GGCCGAGCAA CAGAACATCG AGCTGATCAG CTTCACCCAG CCACAAGTAC CGCGGGTCAT CAGCGGAGAC CCGACGCGTC TGCGCCAGGC CTTGTCGAGC CTGCTGGAAA ACGCCCTGAA AAACACCGAC CAGGGCGAGA TCCTGCTGGT GGTGGCGCTG GATCAACGCG GCGAGGTGCC ACGCCTGCGT ATCGCCGTGC AGGACAGCGG CGAGCCGTTG CCCGCCGCCG ACCGTGAAGC CTTGCTGCAG GCCGAGTTGC ACAGCCACCA TTTCCTTTCC AGCAACAAGC TGGGCGGCCA TCTGGGGCTG GTCATTGCCA AACAGCTGAT CGGTCTGATG CAGGGCGAGT TCGGCATCAA GAGCAGCACC GGCATGGGCA ACACCTTGTG GCTGACCTTG CCGCTGGACC CTTCGCGCCT GGAACAGCCA CCAGCGGACC TCGACAGCCC GCTGCGCGAT GCCCGCGTGC TGGTGGTCGA CGACAACGAC ACGTGCCGCA AGGTGCTTGT ACAGCAGTGC AGTGCCTGGG GCATGAACGT CAGCGCGGTG CCGTCAGGCA AGGAGGCTCT GGCCCTTTTG CGCACCAAGG CGCACCTGCG CGACTACTTC GACGCGGTGC TGCTGGACCA GAACATGCCC GGCATGACCG GCATGCAGCT GGCCGCCAAG ATCAAGGAAG ACCCGAGCCT GAACCACGAC ATTTTGGTGG TGATGCTCAC CGGCATCAGC AATGCGCCGA GCAAAGTCAT CGCGCGCAAC GCCGGGGTCA AGCGAATACT GGCCAAGCCG GTGGCCGGTT ATACGTTGAA GACCACCCTG GCCGAGGAGC TGGCCCAGCG CGGCCGCGAA CAGGCGATGC CTGCCAGCCT GCCTGGCATC CCGCAGGCGC TGGACCTGCC AGGCGACTTC CGCGTGCTGG TCGCCGAAGA CAACAGCATC TCGACCAAGG TGATCCGCAG CATGCTCGGC AAGCTCAACC TCAAGCCCGA TACCGCCTGC AATGGCGAAG AGGCCTTGCA GGCGATGAAA GCGCAGCATT ATGACCTGGT GTTGATGGAC TGCGAGATGC CGATACTGGA CGGTTTCTCG GCCACCCAGC AGTTGCGGGC CTGGGAAGCT GAAAACCAGC GCCAGCGCAC GCCGGTGGTG GCACTGACAG CGCACATACT GGCCGAACAC AAGGAGCGCG CGCGGCTGGC AGGCATGGAC GGACACATGG CCAAACCGGT GGAGTTGTCG CAGTTGCGTG AGCTGATTCA ATACTGGGCC AATCACCGGG AAGCCAAGGT GGACCCGGCA CATACGTCCT GA
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Protein sequence | MRRLRIASAL IVSLLTLLCM FPAAAEHDGG WTVLLDEQAN LQLSDVRSER YRNQFSPLPL ADLDAAPAGQ ALWLHYRLAP GDQEQLLRVF APDLSGLDLY ALEGEQLLRQ LHHGRQAGNA SPTLRGSDHV LPLPNSRQPL DIYLRLVSEH QLRPAISLEP AAEAASDQRQ PLLFGMLFGG LIMLIMHNLI RFLYTRSSTT LILALYHGLM LLSGLILLNL SGPWWHVWHS AQTPAAYLTL VLAGLSGLYF TQHFFSPCNS PRLNRLLQGE MLIVGLSGLV LLFVDTLPLN LMTYALMALG SVSMLLVSSY HWYKGYAPGR LFSLAMVVFN LGGLVLLPAL LGLTRTSTPW LLCILLGLTV VSGLLLNLAV SERLRRISEE RFSASRALAA SDAEINAKAE FLAKISHEIR TPMNGVLGMT ELLLGTPLSV KQRDYVQTIH SAGNELLTLI NEILDISKLE SRQIELDDVQ FDLNALIEDC LNIFRAKAEQ QNIELISFTQ PQVPRVISGD PTRLRQALSS LLENALKNTD QGEILLVVAL DQRGEVPRLR IAVQDSGEPL PAADREALLQ AELHSHHFLS SNKLGGHLGL VIAKQLIGLM QGEFGIKSST GMGNTLWLTL PLDPSRLEQP PADLDSPLRD ARVLVVDDND TCRKVLVQQC SAWGMNVSAV PSGKEALALL RTKAHLRDYF DAVLLDQNMP GMTGMQLAAK IKEDPSLNHD ILVVMLTGIS NAPSKVIARN AGVKRILAKP VAGYTLKTTL AEELAQRGRE QAMPASLPGI PQALDLPGDF RVLVAEDNSI STKVIRSMLG KLNLKPDTAC NGEEALQAMK AQHYDLVLMD CEMPILDGFS ATQQLRAWEA ENQRQRTPVV ALTAHILAEH KERARLAGMD GHMAKPVELS QLRELIQYWA NHREAKVDPA HTS
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