Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4822 |
Symbol | purH |
ID | 1045913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5483484 |
End bp | 5485091 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148223 |
Product | bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
Protein accession | NP_746927 |
Protein GI | 26991502 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.541679 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC AGACTACCCG CCTGCCAGTC CGCCGCGCCC TGATCAGCGT CTCCGACAAG ACCGGTATCC TCGAATTCGC CCGTGAGCTG CAGCAGCTCG GTGTCGAGAT CCTGTCCACC GGCGGCACCT ACAAGCTGCT CAAGGACAAC GGCGTAAACG CGGTGGAAGT GGCCGACTAC ACCGGCTTCG CCGAAATGAT GGATGGCCGG GTCAAAACCC TGCACCCGAA GATCCACGGC GGTATCCTCG GCCGTCGTGG CACCGACGAC GCCATCATGA ACGAGCACGG CATCAAGCCG ATCGACCTGG TTGCGGTCAA CCTGTACCCG TTCGAAGCCA CCATTTCCAA GCCTGGCTGT GACCTGCCGA CCGCCATCGA GAACATCGAC ATCGGCGGCC CGACCATGGT CCGTTCGGCA GCCAAGAACC ACAAGGACGT GGCCATCGTG GTCAACGCCA GCGACTACGC CGGCATCGTC GAAGGCCTCA AGGCCGGTGG CCTGACCTAT GCCCAGCGCT TCGACCTGAT GCTCAAGGCG TTCGAGCACA CTGCCGCCTA CGACGGCATG ATCGCCAACT ACATGGGCAC CATCGACCAG GCCAAGGACA CCCTGAGCAC CGAGGCGCGC AGCGAATTCC CGCGCACCTT CAACAGCCAG TTCGTCAAGG CACAGGAAAT GCGTTATGGC GAGAACCCGC ACCAGAGCGC GGCGTTCTAT GTAGAAGCCA AGAAAGGCGA AGCCAGCATT TCCACCGCTG TCCAGCTGCA AGGCAAGGAA CTGTCATTCA ACAACGTGGC CGATACTGAC GCCGCGCTGG AATGCGTAAA GAGCTTCGTC AAGCCGGCCT GCGTCATCGT CAAGCACGCC AACCCGTGCG GCGTGGCAGT AGTACCGGAA GACGAAGGCG GCATCCGCAA AGCCTACGAC CTGGCCTACG CGACCGACAC CGAATCGGCG TTCGGCGGCA TCATCGCATT CAACCGTGAA CTGGATGGCG AAACCGCCAA GGCCATTGTC GACCGCCAGT TCGTCGAAGT GATCATCGCC CCGAAAATCT CCCAGGCCGC CCGCGACGTG GTGGCTGCCA AACAGAACGT ACGCCTGCTG GAGTGCGGCG AGTGGCCAGC CGAGCGCGCT GCCGGTTGGG ACTTCAAGCG CGTCAATGGC GGCCTGCTGG TGCAAAGCCG CGATATCGGC ATGATCACCG CCGATGACCT GAAGATCGTC ACCAAGCGTG CCCCGACCGA GCAAGAGATC CACGACCTGG TATTCGCCTG GAAAGTGGCC AAGTTCGTCA AGTCCAACGC CATTGTCTAC GCCAAGCAGC GCCAGACCAT CGGCGTCGGC GCCGGCCAGA TGAGCCGCGT CAACTCCGCC CGCATCGCTG CAATCAAGGC TGAGCACGCT GGCCTGCAGG TGCAGGGCGC GGTCATGGCG TCGGATGCAT TCTTCCCGTT CCGTGACGGC ATCGACAATG CAGCTAAAGT GGGTATCAGC GCCGTGATCC AGCCGGGTGG TTCGATGCGT GATGCTGAAG TCATCGCTGC TGCCGACGAG GCCGGCATCG CGATGGTCTT CACTGGCATG CGCCACTTCC GCCACTAA
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Protein sequence | MTDQTTRLPV RRALISVSDK TGILEFAREL QQLGVEILST GGTYKLLKDN GVNAVEVADY TGFAEMMDGR VKTLHPKIHG GILGRRGTDD AIMNEHGIKP IDLVAVNLYP FEATISKPGC DLPTAIENID IGGPTMVRSA AKNHKDVAIV VNASDYAGIV EGLKAGGLTY AQRFDLMLKA FEHTAAYDGM IANYMGTIDQ AKDTLSTEAR SEFPRTFNSQ FVKAQEMRYG ENPHQSAAFY VEAKKGEASI STAVQLQGKE LSFNNVADTD AALECVKSFV KPACVIVKHA NPCGVAVVPE DEGGIRKAYD LAYATDTESA FGGIIAFNRE LDGETAKAIV DRQFVEVIIA PKISQAARDV VAAKQNVRLL ECGEWPAERA AGWDFKRVNG GLLVQSRDIG MITADDLKIV TKRAPTEQEI HDLVFAWKVA KFVKSNAIVY AKQRQTIGVG AGQMSRVNSA RIAAIKAEHA GLQVQGAVMA SDAFFPFRDG IDNAAKVGIS AVIQPGGSMR DAEVIAAADE AGIAMVFTGM RHFRH
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