| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4808 |
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| Symbol | |
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| ID | 1042986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5471918 |
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| End bp | 5472385 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637148209 |
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| Product | rRNA large subunit methyltransferase |
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| Protein accession | NP_746913 |
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| Protein GI | 228994956 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1576] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00246] rRNA large subunit m3Psi methyltransferase RlmH |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.24458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGTCTGC GCCTGATTGC GGTCGGCTCG CGCATGCCGA AGTGGGTCGA GGAAGGCTGG
CATGAATATG CCAAGCGCCT GCCCGCCGAG CTGTCGCTGG AGCTGGTGGA AATCCCGCTG
AATACCCGTG GCAAGAATGC CGACGTCGCC CGCCTGATCC GTCAGGAGGG CGAAGCCATG
CTGAGCAAAG TGCAGCCTGG GGAACGCATT GTCACCCTCG AGGTCCATGG CAAGCCATGG
AGTACCGAGC AGCTGGCGAC CGAGCTGGAC CGCTGGCGCC TGGATGCGCG CACGGTGAAT
TTGATGGTGG GCGGCCCGGA GGGCCTGGCG CCTGAGGTTT GCGCGCGCGC CGAGCAACGT
TGGTCGCTGT CGCCGCTGAC TTTGCCGCAC CCGTTGGTAA GGATACTCAT CGGCGAGCAG
ATCTACCGCG CCTGGACCGT GTTGTCCGGG CACCCTTACC ACAAATGA
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| Protein sequence | MRLRLIAVGS RMPKWVEEGW HEYAKRLPAE LSLELVEIPL NTRGKNADVA RLIRQEGEAM
LSKVQPGERI VTLEVHGKPW STEQLATELD RWRLDARTVN LMVGGPEGLA PEVCARAEQR
WSLSPLTLPH PLVRILIGEQ IYRAWTVLSG HPYHK
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