Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4798 |
Symbol | |
ID | 1041890 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5461059 |
End bp | 5462375 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637148199 |
Product | lytic murein transglycosylase |
Protein accession | NP_746903 |
Protein GI | 26991478 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.287921 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTTCC GTCTTATCCC CCGCTGGGAA ACCCGCCAGC TGATCGCGGC CTCCAGCTTC ATCCTGCTCG TGGCCTGTGC GGAAAAGCCC ACCGCCGCCG ACGCGCTGCC GCTGGCCCCT GCCCAACCCA ATCCCGTGGT GACCGTGCCC GGCGCAACGC CCGACGTCAG CACTGACATC CAGCCCCTGC AAACCTTCGC CCAATGGCAA GCGGGCTTCC GCGAGCAGGC CCTGCAAGCC GGCATTTCGC CGAGCACCTT CGACCGCGCC TTCCTCGGTG TCACCCCCGA CCTGGACGTG ATCAAGGCAG ACCGCAGCCA GCCGGAGTTC ACCCGCCCGG TGTGGGAATA CCTCGAAGGC GCCCTGTCGC CCCTGCGTGT GCGCAACGGC AAGAAGCTGC TGGAGCAGAA CGCCGAGCTG CTGACTCGCC TTGAGCAACG CTATGGCGTG GACCGCCAGG TGCTGGTCGC GGTGTGGGGC ATGGAAAGCA ACTTCGGCCA GTTCCAGGGC AGCAAGTCGG TGATCCGCTC GCTGGCCACT TTGGCCTATG AGGGCCGCCG CCCACAGTTC GCCCAGGATC AGCTGATTGC CGCGCTGCAG ATCATCCAGC ATGGTGACAT CCAGCCTGAA GCCATGCGTG GCTCGTGGGC CGGCGCCATG GGCCAGACCC AGTTCATCCC GACCACCTAC AACACCCATG CCGTGGACTT CGACGGCGAT GGCCGCCGCG ACATCTGGAA CAGCACACCA GACGCCCTGG CCTCAACAGC GCACTACCTG CAGAGTTCGG GCTGGAAACG CGGCCAACCG TGGGGCTTCG AGGTACAGGT GCCGGCCGGC TTCGACTTCT GGCAGGCCGA TGGTGCACTG CGCAAACCGG TGAGTGAATG GCTGGCGATG GGCGTGAAAC TGCCAGCGGG TACCCAGCTG CCGGCAGGTA GCAACCAGCT GTCTGCCGCC CTGCTGCTGC CGGCCGGTGC ACGCGGCCCG GCGTTCCTGG TGCTGGACAA CTTCCGCGCC ATCCTCAAAT ACAACAACTC GTCGTCCTAT GCCCTGGCGG TGAGCCTGCT CGGGGATCGC TTCAGCGGCT GGGGCTTCAT TGCCGGCAGC TGGCCGAAAG AGGACCTGCC GCTCAGCCGC ACCGAGCGCA TGGAGTTGCA GAACTTGCTG AACAGCCGCG GGCATGATGC GGGTAATGCC GATGGCATTA TCGGGGCCAA TACCCGCAAG GCAATCCGCA ATGCCCAGCA AGGGCTGGGA TGGCCGGCGG ATGGCTACCC GACCCACAAG CTGCTTGAGA GCCTGCGCCA GCAGTAA
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Protein sequence | MLFRLIPRWE TRQLIAASSF ILLVACAEKP TAADALPLAP AQPNPVVTVP GATPDVSTDI QPLQTFAQWQ AGFREQALQA GISPSTFDRA FLGVTPDLDV IKADRSQPEF TRPVWEYLEG ALSPLRVRNG KKLLEQNAEL LTRLEQRYGV DRQVLVAVWG MESNFGQFQG SKSVIRSLAT LAYEGRRPQF AQDQLIAALQ IIQHGDIQPE AMRGSWAGAM GQTQFIPTTY NTHAVDFDGD GRRDIWNSTP DALASTAHYL QSSGWKRGQP WGFEVQVPAG FDFWQADGAL RKPVSEWLAM GVKLPAGTQL PAGSNQLSAA LLLPAGARGP AFLVLDNFRA ILKYNNSSSY ALAVSLLGDR FSGWGFIAGS WPKEDLPLSR TERMELQNLL NSRGHDAGNA DGIIGANTRK AIRNAQQGLG WPADGYPTHK LLESLRQQ
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