Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4792 |
Symbol | |
ID | 1042910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5454829 |
End bp | 5455590 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637148193 |
Product | hypothetical protein |
Protein accession | NP_746897 |
Protein GI | 26991472 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.261557 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATCC GATTCTTCAT CAAACAATGG CTGATGCCGC CGGGCGTGCT GTTCTTGCTG CTGCTTGCGG CATGGTGGCT GCGTACGCGG CGGCCCCGGT TGGCGGCGCT TTGCTTTAGC GTAGGGCTGG GTGGCCTGTG GTTGATGAGC CTGCCGCTGG TGGTGCAGGA AACCGCCCGT GTGCTGGAAA GTGAGCCGCC GCTGGCCGTG AGCGACTGGG CCGGCCTGGC GAGCCGGGCG GATGCCATTG TGGTGCTGGG CGCCGGGCGC GAGCGCGGGG ACCCGGCCTG GGGTGGCGGT GACCAGCCCA CGGCCACGGC ACTGGAACGG ATGCGCTTTG CCGCGCGGCT GGCCAAGGCT TCGGGCCTGC CAGTGTTGAC CAGTGGTGGG TTGCATTACG GCACGCCGCC CAGCGAGGCG AGGCTGATGG CGGAACGCTT GCATGAAGAT TTCGCTGTCG AGGTGAAATG GCGCGAAGAG GCCAGCCGCA CGACCTGGGA AAATGCTCAG CTGACGGCCA AGGTGCTGCA GCCTTTGGGA TTTCGCCGGG TGGTGCTGGT GACCCAGGCC TGGCACATGC AGCGCTCACG CTGGAGTTTT GAACAGGCGG GGTTCGAGGT GGTGCCGGCG CCGGTGGGGT TCCTTGGGCG CGATCATGCG CGGCCGTTTG GCGGGCTGCT GCCAGAGAGC CGGGCGATGT GGCAGAGCGG GCAGTTGTTC AATGAAGTGG TGGGGTTGGT GGGGTATCGG GTGTTCTACT GA
|
Protein sequence | MPIRFFIKQW LMPPGVLFLL LLAAWWLRTR RPRLAALCFS VGLGGLWLMS LPLVVQETAR VLESEPPLAV SDWAGLASRA DAIVVLGAGR ERGDPAWGGG DQPTATALER MRFAARLAKA SGLPVLTSGG LHYGTPPSEA RLMAERLHED FAVEVKWREE ASRTTWENAQ LTAKVLQPLG FRRVVLVTQA WHMQRSRWSF EQAGFEVVPA PVGFLGRDHA RPFGGLLPES RAMWQSGQLF NEVVGLVGYR VFY
|
| |