Gene PP_4792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4792 
Symbol 
ID1042910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5454829 
End bp5455590 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content67% 
IMG OID637148193 
Producthypothetical protein 
Protein accessionNP_746897 
Protein GI26991472 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.261557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCC GATTCTTCAT CAAACAATGG CTGATGCCGC CGGGCGTGCT GTTCTTGCTG 
CTGCTTGCGG CATGGTGGCT GCGTACGCGG CGGCCCCGGT TGGCGGCGCT TTGCTTTAGC
GTAGGGCTGG GTGGCCTGTG GTTGATGAGC CTGCCGCTGG TGGTGCAGGA AACCGCCCGT
GTGCTGGAAA GTGAGCCGCC GCTGGCCGTG AGCGACTGGG CCGGCCTGGC GAGCCGGGCG
GATGCCATTG TGGTGCTGGG CGCCGGGCGC GAGCGCGGGG ACCCGGCCTG GGGTGGCGGT
GACCAGCCCA CGGCCACGGC ACTGGAACGG ATGCGCTTTG CCGCGCGGCT GGCCAAGGCT
TCGGGCCTGC CAGTGTTGAC CAGTGGTGGG TTGCATTACG GCACGCCGCC CAGCGAGGCG
AGGCTGATGG CGGAACGCTT GCATGAAGAT TTCGCTGTCG AGGTGAAATG GCGCGAAGAG
GCCAGCCGCA CGACCTGGGA AAATGCTCAG CTGACGGCCA AGGTGCTGCA GCCTTTGGGA
TTTCGCCGGG TGGTGCTGGT GACCCAGGCC TGGCACATGC AGCGCTCACG CTGGAGTTTT
GAACAGGCGG GGTTCGAGGT GGTGCCGGCG CCGGTGGGGT TCCTTGGGCG CGATCATGCG
CGGCCGTTTG GCGGGCTGCT GCCAGAGAGC CGGGCGATGT GGCAGAGCGG GCAGTTGTTC
AATGAAGTGG TGGGGTTGGT GGGGTATCGG GTGTTCTACT GA
 
Protein sequence
MPIRFFIKQW LMPPGVLFLL LLAAWWLRTR RPRLAALCFS VGLGGLWLMS LPLVVQETAR 
VLESEPPLAV SDWAGLASRA DAIVVLGAGR ERGDPAWGGG DQPTATALER MRFAARLAKA
SGLPVLTSGG LHYGTPPSEA RLMAERLHED FAVEVKWREE ASRTTWENAQ LTAKVLQPLG
FRRVVLVTQA WHMQRSRWSF EQAGFEVVPA PVGFLGRDHA RPFGGLLPES RAMWQSGQLF
NEVVGLVGYR VFY