Gene PP_4781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4781 
Symbol 
ID1045745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5442789 
End bp5444777 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content62% 
IMG OID637148182 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_746886 
Protein GI26991461 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00238573 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCTATT TGCTGATTGT GCTTCTGGGT TTGCTGCCCG TGCTGGCCGG AGCGGTCGAT 
TTCGACGACG CTACCCGGCA TCTTCCACTG GGCAAGGCCA TGCAGGTTTA TGAAGACCCC
GATGGCAATG CCAGCATCGC TCAGGTCAGT GCCCCCGGTT TCGCCAAACA CTTTCAGCCC
CACCATGAGG ATGTGCTGAA CGCCGGTTAC TCCACCTCGG TGTTCTGGCT CAAGGTCGAA
CTGCGCCCCA CTGCCGCGCC CAACGCCGCC CCGCGGTCAT GGCTGCTGGA GTTGGCCTAC
CCGCCGCTGG ATCACCTCGA ACTGTATTTG CCTGACAGCA GCGGCTTGTA CCGCCTGGCG
CAGCGCACCG GCGATGCCTT GCCCTACGAC AGCCGGCAGA TCCGGCAGAA CAACTACTTG
TTCGAACTGC AACTGCCACC TGGCAAGGTG ACCACCGCGT ACCTGCGGCT GCACAGCCAG
GGTTCGGTGC AAGCGCCGCT GGCGTTATGG TCCCCTGAAG CCTACCTGGA AGAGCAGCCC
ACGCGCCTGT ATGTGCTGGG GATGATCTAC GGCGTTTTAC TGGTGATGCT GGTGTACAAC
CTGTTCATCT ACCTCAGCGT GCGTGACGTC AGCTACCTCT ATTACATCCT TTACATCGCG
TCGTTCGGCC TTTACCAGGT CTCGGTGAAC GGCGCCGGTG TAGCCTATTT CTGGCCAGAC
AGCCCTTGGT GGGCGAACGC CTCCACGCCT TTGTTCATTG GTGCAGCCGG GCTGTTCGGT
TGCCAGTTCG CCCGGCACTT CCTGCAATTG GGCAGCCTCA ACCGTGGCTT CGATCGCCTG
TTGCAACTGC TGATGCTGGG GGGGGCGCTG GTCATGGTAC TGGCGGTGAG CATGCCTTAC
GGCATTGCGC TGCGCATGGC CACGCTGCTG GCGCTGCTGT TCACCATAAG CGTCTTCAGC
GCCGGCCTGT ATGCCTGGTG GCGCGGCTTG CGAGTGGCGC GCTGGTTCAT CATCGCCTGG
ACGGCGTTCC TGCTTGGTGG CCTGGTCAAC ACCTTGATGG TACTGGGCTA CCTGCCGAAC
GTGTTCATCA CCATGTATGC CAGCCAGCTG GGTTCGGCCT TGGAAGTGGC CTTGCTGTCG
CTGGCACTGG CCGACCGCAT CAACAGCCTG CGCGAGCAGC AGGCACAGAC CTTGCGCGAC
ACTGGGCGTA CGCTGGAGCA ACTGAACCTG CAACTGGCCA GGAGCAATCG CCTGAAGGAC
GAGTTCCTGG CCAGCGTGAC TCATGAGCTG CGTACCCCGA TGAACGGAGT GATTGGCTCG
CTCGAGCTGA TGCACACCCT GCCGATGGGG GCTGAAATGG CTCAGTACCA TCACACGGCT
GTGGGGTCTG CCCAAGGCAT GATGGATATG GTCGATGCCA TTCTTACCCT GTCCGAACTG
CAGGCCGGCC GCCTGCGGGC GCAGCCGGCA CCGTTCAGCC TGCGCGCCCT GTTGCAGGGT
TTGCGCGCCG GTTATGCCGG GCAGGCGCTG GGCAAAGGCC TGTACCTGAG CCTGGACATT
CCGGCCGACC TGCCGGACGG GTTGCTCGGT GACGGGCAGA AGCTGGCGCA CTGCCTGGGT
TGCCTGGTGG ACAACGGTTT GAAGTTCACC CATCAGGGCG GTGTGATGAT CCAGGTGCGC
GGCCGCCGGG TGGGGCCGGA TGATCTGGCG TTGACCTTTA CCGTCAGCGA CAGCGGTATC
GGTTTCGATG ATCTGGAGCA GTCGACCCTG TACCAGCGGT TCTTCCAGGT CGATGGTTCG
ATGACCAGGC GGTATGGCGG TTTGGGGATT GGGTTGTCGA TTTGCCGGCA GATGGGGGAG
TTGCTGGGGG CCAGATTGGC GCATGAATCG ACGCGCGGGC TGGGTAGCCG CTTCGAGTTG
AGTTTGAACA TGGCGATTTC GCAGGCGCAG ATGAGCCCGC ACATGCTGCA GGCGCGGCGC
TCGCTGTAG
 
Protein sequence
MRYLLIVLLG LLPVLAGAVD FDDATRHLPL GKAMQVYEDP DGNASIAQVS APGFAKHFQP 
HHEDVLNAGY STSVFWLKVE LRPTAAPNAA PRSWLLELAY PPLDHLELYL PDSSGLYRLA
QRTGDALPYD SRQIRQNNYL FELQLPPGKV TTAYLRLHSQ GSVQAPLALW SPEAYLEEQP
TRLYVLGMIY GVLLVMLVYN LFIYLSVRDV SYLYYILYIA SFGLYQVSVN GAGVAYFWPD
SPWWANASTP LFIGAAGLFG CQFARHFLQL GSLNRGFDRL LQLLMLGGAL VMVLAVSMPY
GIALRMATLL ALLFTISVFS AGLYAWWRGL RVARWFIIAW TAFLLGGLVN TLMVLGYLPN
VFITMYASQL GSALEVALLS LALADRINSL REQQAQTLRD TGRTLEQLNL QLARSNRLKD
EFLASVTHEL RTPMNGVIGS LELMHTLPMG AEMAQYHHTA VGSAQGMMDM VDAILTLSEL
QAGRLRAQPA PFSLRALLQG LRAGYAGQAL GKGLYLSLDI PADLPDGLLG DGQKLAHCLG
CLVDNGLKFT HQGGVMIQVR GRRVGPDDLA LTFTVSDSGI GFDDLEQSTL YQRFFQVDGS
MTRRYGGLGI GLSICRQMGE LLGARLAHES TRGLGSRFEL SLNMAISQAQ MSPHMLQARR
SL