Gene PP_4734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4734 
Symbol 
ID1043143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5382511 
End bp5383278 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content66% 
IMG OID637148138 
ProductGntR family transcriptional regulator 
Protein accessionNP_746842 
Protein GI26991417 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.315584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00963759 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTTTTG ATCAGGTACG CCAACGGCGC CTGTCCGACG ACATTGTCGA TCGGCTGGAA 
GGGATGATTC TGGAAGGCAC GCTGACCTCG GGGCAGCGGC TGCCGGCCGA GCGCGTCCTG
GCCGAGCAGT TTGGTGTGTC CCGCCCGTCA CTGCGTGAGG CGATCCAGAA GCTGGTGGCC
AAGGGGCTGC TGGTCAGCCG TCAGGGCGGG GGCAATTTTG TGGCGGAGTC GTTGGGGTCC
ACCTTCAGCG ACCCGTTGCT GCAGCTGCTC GAGCACAGTG CCGAAGCGCA GCGTGACCTG
CTCGAGTTCC GCCATACCCT GGAGGCGTCC TGCGCCTATT ACGCTGCCCA GCGTGCCACC
GAGCCGGACC GGGCACGGTT GAAGGCGGCC TTCGATGCGC TGCAGGACTG CTATGCCAGG
GTCGATGAGG TGACCCGTGC GGAAGAGGGC GCGGCTGATG CGCGCTTCCA CCTGGCGATC
GCCGAGGCCA GTCATAACGC GGTGTTGCTG CACACCATCC GGGGGCTGTT CGACCTGCTC
AAGCGCAACG TGGTGACCAA CATCGGCGGC ATGTACCAGC AGCGCACCGA AACCCGGGAC
ATGCTGATCA GCCAGCACCG GGAACTGTAC CTGGCGATTG TCGAGGGCAG GGCGGAGGAT
GCGCGGGAGG TGTCCAGCCG GCACATTTTG TATGTGCAGG AGGTGCTGCA TGAGGCGCAC
GAAGAAGCCC AGCGGGTGGC GCGGGCAGAG CGGCGCAGCG GGCGCTGA
 
Protein sequence
MVFDQVRQRR LSDDIVDRLE GMILEGTLTS GQRLPAERVL AEQFGVSRPS LREAIQKLVA 
KGLLVSRQGG GNFVAESLGS TFSDPLLQLL EHSAEAQRDL LEFRHTLEAS CAYYAAQRAT
EPDRARLKAA FDALQDCYAR VDEVTRAEEG AADARFHLAI AEASHNAVLL HTIRGLFDLL
KRNVVTNIGG MYQQRTETRD MLISQHRELY LAIVEGRAED AREVSSRHIL YVQEVLHEAH
EEAQRVARAE RRSGR