| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4715 |
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| Symbol | tpiA |
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| ID | 1042365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5361602 |
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| End bp | 5362357 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637148119 |
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| Product | triosephosphate isomerase |
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| Protein accession | NP_746823 |
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| Protein GI | 26991398 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0149] Triosephosphate isomerase |
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| TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.151784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00871946 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGTCGCC CTATGGTAGC TGGTAACTGG AAAATGCACG GTACCCGCGC TAGCGTCGCT
GAGCTGACCA AAGGCTTGAG TAATCTCGCC TTGCCGAGCG GAGTGGAAGT CGCCGTATTT
CCACCGGCCT TGTTCATCAA TCAGGTGATT GATGGCCTGG CAGGTAAAGA AATTACTGTC
GGCGCACAGA ATTCTGCTGT ACAACCCGAA CAGGGTGCGC TGACCGGGGA AGTTGCTCCC
GAGCAGCTGG TTGAAGCAGG TTGCAAGTTG GTGTTGATTG GCCATTCGGA GCGTCGCCAG
ATTATTGGTG AAACCGACGA AGTGCTCAAT CGCAAGTTTG CAGCGGCCCA GGCCAAAGGC
TTGAAGCCAG TGCTTTGCAT AGGGGAAACC CTTGAGGAGC GCGAGGCTGG CAAGACGCTC
GAAGTTGTCG GGCGTCAACT AAGCAGTATC ATCGAAGCAT TCGGTGTTAA GGCTTTTGCC
GATGCAGTAA TTGCCTATGA GCCTGTATGG GCCATCGGTA CGGGCCTTAC GGCCACGCCA
CAGCAGGCCC AGGATGTGCA CGCCGCCATC CGCGGCCAGT TGGCGGCAGA AGATGCTGAA
GTGGCTGCGA AGGTGCAGTT GCTATACGGC GGCAGCGTGA AGGCGGCCAA TGCGGCCGAA
CTGTTCGGCA TGCCGGATAT CGATGGGGGT CTCATTGGTG GGGCTTCCCT GAACGCAGAC
GAATTCGGTG CAATTTGTCG CGCCGCAGGA AACTGA
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| Protein sequence | MRRPMVAGNW KMHGTRASVA ELTKGLSNLA LPSGVEVAVF PPALFINQVI DGLAGKEITV
GAQNSAVQPE QGALTGEVAP EQLVEAGCKL VLIGHSERRQ IIGETDEVLN RKFAAAQAKG
LKPVLCIGET LEEREAGKTL EVVGRQLSSI IEAFGVKAFA DAVIAYEPVW AIGTGLTATP
QQAQDVHAAI RGQLAAEDAE VAAKVQLLYG GSVKAANAAE LFGMPDIDGG LIGGASLNAD
EFGAICRAAG N
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