Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4713 |
Symbol | nusA |
ID | 1042024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5358786 |
End bp | 5360267 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637148115 |
Product | transcription elongation factor NusA |
Protein accession | NP_746821 |
Protein GI | 26991396 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA [TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00944851 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCAAAG AAGTACTGCT GGTTGTTGAA TCGGTATCCA ACGAAAAAGG TGTACCGCCC GGCGTCATTT TCGAAGCGCT GGAAGTGGCC CTGGCCACTG CAACCAAAAA ACGTTTTGAA GACGAAGTCG ACCTACGTGT GGAAATCAAC CGCCACACCG GTAGCTACGA GACTTTCCGT CGCTGGACCG TGGTCGACGA AGCCGATCTT GATGATCCGG CGATCGAGAC CTGGCTGGAC AAGATCAAGG ACACCCACCC TGAAGCCAAG GTCGGTGACG TGATCGAAGA GAAGATCGAG TCCATCGAGT TCGGTCGTAT TGCCGCCCAG ACCGCCAAGC AGGTCATCGT GCAGAAGGTC CGTGAGGCCG AGCGTGCCCA GGTGGTCGAT GCCTACCGTG AGCGCGTTGG CGAGATTATC TCCGGTACCG TAAAAAAGGT TACCCGCGAC AACGTCATCG TTGACCTGGG CAACAACGCC GAGGCCTTGC TGGCTCGCGA AGACATCATT CCGCGCGAAA CCTTCCGTGT TGGTGTGCGC CTGCGTGCGC TGCTCAAGGA AATTCGCACC GAAAACCGTG GCCCACAGCT GATCCTGTCG CGCACCGCGC CGCAGATGCT GATCGAGCTT TTCCGCATTG AAGTGCCGGA AATTGCCGAG GGCCTCATCG AAGTCATGGC TGCTTCCCGT GATCCGGGTT CGCGAGCCAA GATTGCCGTC CGCTCCAAGG ACAAGCGTAT CGACCCGCAA GGTGCCTGCA TCGGCATGCG TGGTTCGCGC GTCCAGGCCG TATCCGGGGA GCTGGGTGGT GAGCGTGTGG ATATCGTCCT TTGGGACGAT AACCCGGCGC AGTTCGTCAT CAACGCCATG TCGCCGGCTG AAGTCGCGGC GATCATCGTT GATGAAGATG CCCATGCCAT GGACATCGCC GTCGCCGAGG ACAACCTGGC CCAGGCCATT GGCCGTGGCG GTCAGAACGT TCGCCTGGCC AGTCAGTTGA CCGGCTGGAC CCTGAACGTG ATGACCGAGA AGGACATCCA GGCCAAGCAA CAGGCCGAAA CCGGTGACAT CCTGCGCAAT TTCATCGAGG AACTGGAAGT CGACGAGGAG CTGGCCCAAG TGCTGGTCGA CGAAGGCTTC ACCAGCCTTG AAGAAATTGC CTACGTACCG TTGGAAGAAA TGCTCAACAT CGATGGCTTT GACGAAGACA TCGTCAATGA GCTCCGCGCT CGAGCCAAGG ACCGTTTGTT GACCAAGGCC ATCGCTACCG AAGAAAAACT GGCAGACGCC CACCCGGCCG AAGACCTGCT CTCCCTTGAG GGCATGGACA AAGACCTGGC GGCTGAACTG GCGGTGCGCG GCGTGGTTAA CCGCGAAGAC CTGGCCGAGC AGTCGATCGA CGATCTGCTC GACATCGACG GCATCGACGA AGAGCGTGCC GGCAAGTTGA TCATGGCCGC CCGAGCCCAC TGGTTCGAGT AA
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Protein sequence | MSKEVLLVVE SVSNEKGVPP GVIFEALEVA LATATKKRFE DEVDLRVEIN RHTGSYETFR RWTVVDEADL DDPAIETWLD KIKDTHPEAK VGDVIEEKIE SIEFGRIAAQ TAKQVIVQKV REAERAQVVD AYRERVGEII SGTVKKVTRD NVIVDLGNNA EALLAREDII PRETFRVGVR LRALLKEIRT ENRGPQLILS RTAPQMLIEL FRIEVPEIAE GLIEVMAASR DPGSRAKIAV RSKDKRIDPQ GACIGMRGSR VQAVSGELGG ERVDIVLWDD NPAQFVINAM SPAEVAAIIV DEDAHAMDIA VAEDNLAQAI GRGGQNVRLA SQLTGWTLNV MTEKDIQAKQ QAETGDILRN FIEELEVDEE LAQVLVDEGF TSLEEIAYVP LEEMLNIDGF DEDIVNELRA RAKDRLLTKA IATEEKLADA HPAEDLLSLE GMDKDLAAEL AVRGVVNRED LAEQSIDDLL DIDGIDEERA GKLIMAARAH WFE
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