Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4709 |
Symbol | rpsO |
ID | 1043991 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5354365 |
End bp | 5354634 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637148112 |
Product | 30S ribosomal protein S15 |
Protein accession | NP_746818 |
Protein GI | 161378121 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00644247 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCCTCA GCGTTGAAGA AAAAGCTCAG ATCGTTGCCG AATATCAGCA AGCCGCCGGC GATACCGGTA GCCCGGAAGT GCAGGTTGCT CTGCTGACCG CCAACATCAA CAAGCTGCAA GGCCACTTCA AGGCCAACGA CAAAGACCAC CACTCCCGTC GTGGTCTGAT CCGTATGGTC AACCAGCGTC GTAAGCTGCT GGATTACCTG AAGGGCAAAG ACACCACTCG TTACAGCGCC CTGATCGGTC GCCTGGGCCT GCGTCGCTAA
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Protein sequence | MALSVEEKAQ IVAEYQQAAG DTGSPEVQVA LLTANINKLQ GHFKANDKDH HSRRGLIRMV NQRRKLLDYL KGKDTTRYSA LIGRLGLRR
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