Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4701 |
Symbol | pgi |
ID | 1045885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5342759 |
End bp | 5344423 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637148104 |
Product | glucose-6-phosphate isomerase |
Protein accession | NP_746810 |
Protein GI | 26991385 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00101931 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGTATT ACCGTACACC CCACGATGTG ACGGCCCTGC CCGCCTGGCA GGCGCTTCAG AAACACCGCG ACGCCATGCA AAGCTTCAGC ATGCGCGAAG CCTTCGCCGC CGATGCCAAG CGCTTCGACC AGTTTTCCCT CAGCGCTTGC GGCCTGTTCC TCGACTACTC GAAAAACCTG ATCACCGAGC AAAGCCGCGA TCTGCTGGTC AATCTGGCCA ATGAAGTGGG CCTGCAGGAC GCCATCAAGT CGATGTTCAG CGGTGAGATC ATCAACGCCT CCGAAGGCCG TCCGGTGCTG CACACCGCCT TGCGCCGGCC TGTAGGTGAC AAACTCAGCG TCAACGGCGT GAACGTCATG CCGGAAGTGC ACAAGGTGCT CAACCAGATT ACCGAACTGG TTGGTCGCAT TCACGATGGC CTGTGGCGCG GCTACAGCGA AAAGCCGATC ACCGACGTGG TCAACATTGG CATTGGCGGT TCGTTCCTCG GCCCCGAGCT GGTTTCCGAA GCGCTGCTAC CCTACGCCCA GCGCGGCGTG CGCTGCCACT ACCTGGCCAA TATCGACGGC AGCGAGTTCC ACGAGCTGTC GGCCAACCTG CGCGCCGAAA CCACCCTGTT CATCGTCTCA TCGAAGTCGT TCAACACCCT CGAGACGCTG AAAAACGCCA TGGCCGCGCG TACCTGGTAC CTGGCCCAAG GCGGCTCGGA AGCCGAGCTG TACCGCCACT TCATTGCCGT ATCCAGCAAC AAGGCCGCTG CTGTAGCGTT CGGTATCCGC GAAGAAAACA TCTTCCCAAT GTGGGACTGG GTGGGCGGGC GCTACTCGCT GTGGTCGGCC ATCGGCCTGC CGATCGCCCT GGCCATCGGC ACTGCCAACT TCAAGGAACT GCTGTCCGGC GCCTACACCA TGGACCAGCA CTTCCAGACC GCACCGTTCG ACAAGAACAT GCCGGTGCTA CTGGCCCTGC TGGGCGTGTG GTATGGCAAC TTCTGGGACG CAAACAGCCA CGCGATCCTG CCGTACGACC ACTACCTGCG CAACATCACC AAGCACCTGC AGCAGCTGGA CATGGAATCC AACGGCAAGA GCGTGCTGCA AGACGGTACC CCGGTGAAGA CCGACACCGG GCCGGTGATC TGGGGCGGCG TGGGCTGCAA CGGCCAGCAT GCCTACCACC AGTTGCTGCA CCAGGGCACC CAGTTGATTC CGGCCGATTT CATCGTGCCG GTGGTGAGCT TCAACCCGGT GGCCGACCAC CACCAGTGGC TGTACGCCAA CTGCCTGTCG CAGAGCCAGG CGCTGATGCT GGGCAAAACC CGCGAGGAAG CCGAAGCCGA ATTGCGCGCT AAAGGCCTCA ACGAAGCAGA CATCGAAAAG CTGGCCCCGC ACAAGGTGAT CCCGGGTAAC CGCCCGAGCA ACACGTTGGT GGTCGAGCGC ATCAGCCCGC GCCGGCTGGG TGCGCTGGTG GCCATGTACG AGCACAAGGT GTTCGTACAG AGCGTTATCT GGGGTATCAA CGCCTTCGAT CAGTGGGGCG TCGAGCTGGG CAAGGAGCTG GGCAAGGGCG TTTACCAGCG CTTGGTCGGT AGCCTGGAAG ACAGCGCCGA AGACGGTTCC ACCCAAGGCC TGATCAACTA CTTCCGCGGC CGTCACCGCG GTTGA
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Protein sequence | MAYYRTPHDV TALPAWQALQ KHRDAMQSFS MREAFAADAK RFDQFSLSAC GLFLDYSKNL ITEQSRDLLV NLANEVGLQD AIKSMFSGEI INASEGRPVL HTALRRPVGD KLSVNGVNVM PEVHKVLNQI TELVGRIHDG LWRGYSEKPI TDVVNIGIGG SFLGPELVSE ALLPYAQRGV RCHYLANIDG SEFHELSANL RAETTLFIVS SKSFNTLETL KNAMAARTWY LAQGGSEAEL YRHFIAVSSN KAAAVAFGIR EENIFPMWDW VGGRYSLWSA IGLPIALAIG TANFKELLSG AYTMDQHFQT APFDKNMPVL LALLGVWYGN FWDANSHAIL PYDHYLRNIT KHLQQLDMES NGKSVLQDGT PVKTDTGPVI WGGVGCNGQH AYHQLLHQGT QLIPADFIVP VVSFNPVADH HQWLYANCLS QSQALMLGKT REEAEAELRA KGLNEADIEK LAPHKVIPGN RPSNTLVVER ISPRRLGALV AMYEHKVFVQ SVIWGINAFD QWGVELGKEL GKGVYQRLVG SLEDSAEDGS TQGLINYFRG RHRG
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