Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4697 |
Symbol | pcnB |
ID | 1045263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5338771 |
End bp | 5340153 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637148100 |
Product | poly(A) polymerase |
Protein accession | NP_746806 |
Protein GI | 26991381 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0617] tRNA nucleotidyltransferase/poly(A) polymerase |
TIGRFAM ID | [TIGR01942] poly(A) polymerase |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.233553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000455164 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGAAGA AGCTGTTCCA GTCTTTCCGC CCGCCCGTAC CGGGCCCGCA CCACAGGCGC ACCACGCCCG AGGTGATCAA CAAGAGCCAG CACTCGCTGC AGCGCCACCA GTTCAGCCGT CATGCGGTGA ACATCGTGGA GCGCCTGCAA AGCGCCGGCT ACCAGGCTTA CCTGGTCGGT GGCTGTGTCC GCGACCTGAT GCTGGGCATC ACGCCGAAGG ACTTCGACGT CGCCACCAGC GCCACCCCCG AACAGGTCCG TGCCGAGTTC CGCAACGCCC GCATCATTGG TCGTCGCTTC AAATTGGTCC ATGTGCATTT CGGCCGTGAG ATCATTGAAG TCGCCACCTT CCGCGCCCAC CACTCCGAGG ACGACCAGGG CGATGCCCAC CGTTCGTCGC ATAACGCCAG TGGCCGCATT CTGCGAGACA ACGTGTACGG CACCCTGGAA GAGGACGCGC AACGCCGCGA CTTCACCATC AACGCCCTGT ACTACGATCC GGTCAGCGAG CGCATTCTCG ATTACGCCAA CGGTGTGCAC GACGTGCGCA ATCGCCTGCT GCGGCTGATC GGAGACCCGA CCCACCGCTA CCAGGAAGAC CCGGTGCGCA TGCTGCGCGC GGTGCGCTTT GCTGCCAAGC TCGACTTTGG CATCGAAAAG CACACTTACC TGCCGATTCG CGGCCTGGCC CCGATGCTGC GCGAGATTCC ACCCGCGCGC CTGTTCGAGG AATGCCTCAA GCTGTTCCTC AGCGGCCAAG GTGCCATCGC CTTCGAAATG CTGGTTGACC TGGAGTTGTT CGAACCACTG TTCCCGGCCA GTGCCCACGC GCTGGACGAG CGGCCGACCT ACACCCACAC GCTGATCAGC CAGGCACTGA ACAACACCGA CCTGCGCGTG AAGCAGGGCA AGCCGGTGAC GCCAGCCTTC CTGTTTGCTG CTCTGCTCTG GCCAGCCCTG CCGGCCCGTG TGCTGCACCT GCAGAACCAG GGCGTGCCGC CGATCCCGGC CATGAACGGT GCGGCCCACG ACCTGATCGC CGAGCAGTGC GCGCGCATTG CCATCCCCAA GCGTTTTACC CTGCCGATCC GCGAGATCTG GGACATGCAG GAGCGCCTGC CGCGCCGCAG CGGCAAGCGC GCCGACATGC TGCTGGACAA CCCGCGTTTC CGCGCCGGTT ACGACTTCCT GCTGCTGCGT GAAAGCGCCG GGGAAGAAAC CGACGAACTG GGCCAGTGGT GGACCGATTA CCAGGACGCA AACGACAGCG AGCGCCGCGA GATGATCCGC GAGCTTGGTA GCCGTGACGA AAGTGCCGGC CCGCGCAAGC GCAAGCGCAG CGGCAGCAAA CGCAAGCGCA GTGGCGACGA GGCGTTCGAG TGA
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Protein sequence | MLKKLFQSFR PPVPGPHHRR TTPEVINKSQ HSLQRHQFSR HAVNIVERLQ SAGYQAYLVG GCVRDLMLGI TPKDFDVATS ATPEQVRAEF RNARIIGRRF KLVHVHFGRE IIEVATFRAH HSEDDQGDAH RSSHNASGRI LRDNVYGTLE EDAQRRDFTI NALYYDPVSE RILDYANGVH DVRNRLLRLI GDPTHRYQED PVRMLRAVRF AAKLDFGIEK HTYLPIRGLA PMLREIPPAR LFEECLKLFL SGQGAIAFEM LVDLELFEPL FPASAHALDE RPTYTHTLIS QALNNTDLRV KQGKPVTPAF LFAALLWPAL PARVLHLQNQ GVPPIPAMNG AAHDLIAEQC ARIAIPKRFT LPIREIWDMQ ERLPRRSGKR ADMLLDNPRF RAGYDFLLLR ESAGEETDEL GQWWTDYQDA NDSERREMIR ELGSRDESAG PRKRKRSGSK RKRSGDEAFE
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