Gene PP_4686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4686 
Symbol 
ID1042034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5325545 
End bp5326429 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID637148089 
Producthypothetical protein 
Protein accessionNP_746795 
Protein GI26991370 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0433823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00020282 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGACACC CGCTGCTGTC CGGTTTCTCG CTGTGCCTGG TACTGGCAAT AGGCGGCTGT 
CAGGCCAGCC TGCCGCCGTT GCCCGCCTGG CAGAGCAGTG AAGGTCGCAC GCACGCCGAG
CTGGGAAAGA TTGTCGACCT GTCCAATGAG CAGGTCATAA GCCCTGAAAC GCTGGTGCAG
CGCCTGGCTG ATGCGCCCCG AGTGCTTGTC GGCGAGAAGC ATGACAACCC TGACCATCAC
GCGCTGCAAC TGTGGCTGCT GCGCGCTCTT CAAGGCCAGC GCACTCAGGG CAGCCTGTTG
CTGGAGATGC TGCAGCCCAG CCAGCAATCG CGGGTGGACA AGCTGGTGGG GCAGCCTTTG
CCGGAAGACT TGCCCAAGGC ACTGGCCTGG CAGGAGGGCT GGGATTGGCA GTTGTACGGG
CCGATTGTCA CCGAAGCCTT GCAGCATCGG GTGACGTTGC TGGCCGCCAA CCTTTCGCCC
GACGAGATGC GTCAGGCCTA TCGACAGCCG GCTCCGGTGC CGGGCGAAAA GTCCAATGCA
CCCGCGGTAA AGGCTGCCTT GCTGGAACAG GTGCGCGCCG GGCATTGCGG GATGCTGCCG
GAAAACCAGT TACCGGCGAT GCTGGCCGTT CAGCAGCAGC GCGACCGGCG CATGGCCGAG
CGCTTGCAGG CGGCACCGCA ACCGGCACTG CTGTTTGCCG GGGCTTACCA TGTGCGCAAG
GACCTGGGCA TACCCTTGCA TCTGGCTGAC CTGGGGGCGA CGGGGGAGAG CAAGGTATTG
CTGCTGGCTG AGGTGGGCGA GCGAACCGAG CCTGGCGAGG CTGATTATGT GTGGTACACG
GCGGCGATGC CGGAGCAGGA TTATTGTGCG CAGCTGCGGC GCTGA
 
Protein sequence
MRHPLLSGFS LCLVLAIGGC QASLPPLPAW QSSEGRTHAE LGKIVDLSNE QVISPETLVQ 
RLADAPRVLV GEKHDNPDHH ALQLWLLRAL QGQRTQGSLL LEMLQPSQQS RVDKLVGQPL
PEDLPKALAW QEGWDWQLYG PIVTEALQHR VTLLAANLSP DEMRQAYRQP APVPGEKSNA
PAVKAALLEQ VRAGHCGMLP ENQLPAMLAV QQQRDRRMAE RLQAAPQPAL LFAGAYHVRK
DLGIPLHLAD LGATGESKVL LLAEVGERTE PGEADYVWYT AAMPEQDYCA QLRR