Gene PP_4610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4610 
Symbol 
ID1042401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5231116 
End bp5233041 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content62% 
IMG OID637148008 
ProductPepSY-associated TM helix domain protein 
Protein accessionNP_746719 
Protein GI26991294 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATCAT TAGTATTGCA ACCCCGAAAA CGCCCGGACC TTCGCCATGA CGCGCAAAAC 
CGCCGGCCTC CCGTTCAGTT ACCGGCTGGG CGTTGCCTCA CGCAGCCTGG CCGCGCTGCT
GGGCGGCTAC TTGCTGGCGT CGATGGCCAG TGTCTGTATT GCCTTGCTGG CGCCGTTGCC
AAAGGTCGAT GCCACGCTCA CCGGCCTGCT GCTGTCGTTC GTCTTCTACC TGCTGGCGTT
CATCTGGTGT TTCGCCTGCC GCAGCGCCTG GCGTGCCTGG TTGGGCGTAT TGGCGCCAAG
CCTGCTGCTG GGCGTGATCA GCGGCGTTGC CTACTGGATG AAAAACGCAT GAAAGAAGGC
TTCCGCCAGG CCATGGCCTG GCTGCACACC TGGACCGGCC TGATCTTCGG CTGGCTGTTG
TTCGCCATCT TCCTTACCGG CACGCTGTCG TACTTCAAGG AAGAAATCAC TCATTGGTCG
CAACCTGAAG TGCGCAGCCA TGCCCTGGAC CCGATCAATA GCCTGGCGGT CGCTCAACGT
TACCTGCAGG ACAATGCAGG GCATTCGAGT ACCTGGTTCA TTCGCATGCC GAACGAACGG
GAGGCCGCCT TGAGTGTGGG GTACCGCGAC CCCAGTGGCG GCCCGCGTGG CTTCGTCAGG
AAAACCCTCG ATACCCAGAC CGGCCAGCCG GTGGAAGCAC GTGACAGCCG CGGTGGTGAG
TTCTTCTACC GCTTTCACTT CCAGCTTCAG ATGCCTTACC CGGTTGGCCG TTGGCTCTCG
ACGTTCTGCG CTTTCATCAT GCTGCTGGGG TTGGTCACCG GCATCATTAC CCACAAGAAG
ATCTTCAAGG AGTTCTTCAC CTTCCGCCCT GGCAAGGGGC AGCGTTCCTG GCTGGACGGG
CACAATGCCA TCGGCGTGCT GGTGCTGCCG TTTCACCTGA TGATCAGCTA CAGCAGCCTG
GTGCTGTTCA TGTACATGGT GATGCCGGCG GGCATCATGG CCAGCTACGG CAATGACACC
GACAAGTACT TCAACGACCT GTTTGGCCGC AACGATGCGC CCAAGGCGGC CCAGGTGGCC
ACGCCGCTGG TAGCGCTGCC GAGCCTGTAC GCCAAGGTGC AGGAGCTGCA GCCGGGGGCG
CGTGTCGGCA ACATCCAGGT GCAGAACCCG GGCGACAGCA ATGCCCGCGT TACCTTCACC
CAATCGGCAG CCGACCACGT GGCTTATCGG CGTAGCGCCA ACTGGACATT CGATGGGGCC
AGTGGTGCGC TGTTGAGCCA GGGCAAGCCA GAGAGCGGGG TAATGATGAC CGCCTTCAGT
TTCGCCGGCC TGCACATGGG TAACTTTGCC GGGCCTTGGC TGCGCTGGCT GTACTTCTTC
TTTGGCGTGG CCGGTACTGC GGTGATTGGT ACCGGGTTGG TGATGTGGTT GGGCAAGCGC
CAGCTCAAGC ACGCCAAGAA CGGGCATATG CCAGGTGAGC TGCGTTTGGT CGAAGTGCTC
AATATTGCCA GCATGAGCGG CTTGTTGCTG GCGGTGGCGA GCTTCTTCTG GGCCAACCGC
CTGGTGCCCA TGGCTGTCGA AGGCCGCGCC GACTGGGAGG TCAATGCTTT CTTCATCGCC
TGGGGCCTGT CGCTGGTGCA CGCCGTGCTG CGTAGCGGGC GCAAGGCCTG GGGCGAGCAA
CTGGCGCTGG GGGCGCTGGC CTTCGCGCTG CTGCCGTTGC TCAATGGCCT GACGACTGAC
CGGGGCTTGA ACCATTCGGT ACTGGAGGGC GACTGGGCCA TGGCCGGCTT CGATCTGACA
GCCCTGGGGA CCGGCCTGTT TCTGGCCTGG CTGGCTCGCA AGATGCTGGT CAGCCCCACG
CCCGTAGCCA AGCGCGCGGC ACGTGCGGCA AAAAAACCGA GCATTGAAAC GTTGGGGGCG
AGCTGA
 
Protein sequence
MKSLVLQPRK RPDLRHDAQN RRPPVQLPAG RCLTQPGRAA GRLLAGVDGQ CLYCLAGAVA 
KGRCHAHRPA AVVRLLPAGV HLVFRLPQRL ACLVGRIGAK PAAGRDQRRC LLDEKRMKEG
FRQAMAWLHT WTGLIFGWLL FAIFLTGTLS YFKEEITHWS QPEVRSHALD PINSLAVAQR
YLQDNAGHSS TWFIRMPNER EAALSVGYRD PSGGPRGFVR KTLDTQTGQP VEARDSRGGE
FFYRFHFQLQ MPYPVGRWLS TFCAFIMLLG LVTGIITHKK IFKEFFTFRP GKGQRSWLDG
HNAIGVLVLP FHLMISYSSL VLFMYMVMPA GIMASYGNDT DKYFNDLFGR NDAPKAAQVA
TPLVALPSLY AKVQELQPGA RVGNIQVQNP GDSNARVTFT QSAADHVAYR RSANWTFDGA
SGALLSQGKP ESGVMMTAFS FAGLHMGNFA GPWLRWLYFF FGVAGTAVIG TGLVMWLGKR
QLKHAKNGHM PGELRLVEVL NIASMSGLLL AVASFFWANR LVPMAVEGRA DWEVNAFFIA
WGLSLVHAVL RSGRKAWGEQ LALGALAFAL LPLLNGLTTD RGLNHSVLEG DWAMAGFDLT
ALGTGLFLAW LARKMLVSPT PVAKRAARAA KKPSIETLGA S