Gene PP_4607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4607 
Symbol 
ID1045959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp5229232 
End bp5230212 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content67% 
IMG OID637148005 
Productanti-FecI sigma factor, FecR 
Protein accessionNP_746716 
Protein GI26991291 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGTT TACCGCCGAT CACCGAAGCG CAGTTCCAGG CTGCCCTGCA ATGGTTCAAC 
CGGATCAACG AGCAACCCGG GCAAGCCGAA GGGGCGGCAT TCAAGCGCTG GTTGCTGGCC
GACCCCGCAC ACCGCGCAGC CTACGACCAG GCCCAGGTGC TTTGGCAGAA AAGCGCCGCC
CCGGCGGCGC GGCTGGCGGA CGAAGAGCAG GACGCCCTGC AGCGCTACCT CGATGCCATG
GCCAGACCAC CGGCGCGTGG TGGCTGGCGG CGGGTGGCAG GCCTGGCGTT GGCAGCCTGC
CTGGTGCTGG CCGTGGGCGT CGCTGGTGGT TGGCACCCGG GGTACTGGTT GCAGGACCTG
CAGGCGGACT ACAGCAGTAC CGGGCAGATT CGCCAGGTGA TTTTGGCCGA CCAGTCACAG
GTGACGCTTG ATGCAGGTAG CGCCATTGCG GTCGATTTCG CCCAGGGTGA GCGCCGTGTG
CGGTTGCTGC ATGGCGCGGC GTTCTTCGAG GTTACCCATA CCGGTGAGCC GTTCCTGGTG
GAAGCTGCCG GCGGCGAAGT GCGGGTGCTC GGCACCCAGT TCGAGGTGCG TGAGCAAGGC
GAGGGCGCCC AGGTGACGGT GCGCAGCGGG CGTGTGGGCG TCAGCCCCGC GCAGGGCACT
GTGGCGCGAG AACTGACTGC CAACCAGCAG CTGACCTACC GCGCAGGTAG GGTAGGCGAC
ACCTTGGCGG TGGACAGTGA CAACCGCCTG GCCTGGCGCC AGGGGTGGCT GAACTATTAC
CAGGTGCCGC TGGCGCAGGT GATCGATGAC CTTGGGCGTT ATTACCCGGG GCGTATCCTG
TTGCTCGATG GTGACCTGGG GCAGCGCAAG GTCAGCGGCA GCTTCCCGGT GGCCGAGCCG
CTGCTGGCGC TGGATTCGCT GGGCAAGGTG ATGGGTTTTT CACGGCAGAC CGTGTTGGGG
CGTTTGACCC TGGTTCGGTA G
 
Protein sequence
MSRLPPITEA QFQAALQWFN RINEQPGQAE GAAFKRWLLA DPAHRAAYDQ AQVLWQKSAA 
PAARLADEEQ DALQRYLDAM ARPPARGGWR RVAGLALAAC LVLAVGVAGG WHPGYWLQDL
QADYSSTGQI RQVILADQSQ VTLDAGSAIA VDFAQGERRV RLLHGAAFFE VTHTGEPFLV
EAAGGEVRVL GTQFEVREQG EGAQVTVRSG RVGVSPAQGT VARELTANQQ LTYRAGRVGD
TLAVDSDNRL AWRQGWLNYY QVPLAQVIDD LGRYYPGRIL LLDGDLGQRK VSGSFPVAEP
LLALDSLGKV MGFSRQTVLG RLTLVR