| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4506 |
|---|
| Symbol | |
|---|
| ID | 1041845 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5119696 |
|---|
| End bp | 5120253 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637147905 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | NP_746616 |
|---|
| Protein GI | 26991191 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGCTC TCGACGCATT GCTCAACCGT GTTTCCGTGC CACGCCTGAC CGACCCGGCG
CCCAATGCCG CCCAGCGCGA GGCGCTGTTC CAGGCTGCCC TGCGCGCCCC GGATCACGGC
CAGCTGCGGC CGTGGCGTTT TCTTACCATC GAAGGCCAGG GCCGCGAGAA GCTGGGTGAG
CTGTTCGCCG AAGCCGTGCA GCACAAGGGC GATGCCAGCC AGGCTGCACT GGACAAGGCC
CGTGCGATGC CGCTGCGGGC GCCGTTGCTG ATCGTGGTGG TGGCCAGGTT GCAGGACCAC
TTCAAGGTGC CCAAGTCCGA GCAGCGCCTG GCGGCGGGCT GTGCGGCGCA CGGTATTCTG
ATTGCTGCGC ACGCGCAGGG GATCGGCGCG GTGTGGCGTA CCGGTGACAT GGCCTTCGAT
GCCCATGTGC ACAAGGGGTT GGGGTTGGCC GAGAACGAGG AGCTGATCGG CTACCTGTAT
GTCGGTACGC CGCTGACCGA ACCGCGGACG GCGCCGGTGC TGGAAACGGC TGATTTCGTT
AGTAGCTGGG GTGAGTAA
|
|---|
| Protein sequence | MEALDALLNR VSVPRLTDPA PNAAQREALF QAALRAPDHG QLRPWRFLTI EGQGREKLGE
LFAEAVQHKG DASQAALDKA RAMPLRAPLL IVVVARLQDH FKVPKSEQRL AAGCAAHGIL
IAAHAQGIGA VWRTGDMAFD AHVHKGLGLA ENEELIGYLY VGTPLTEPRT APVLETADFV
SSWGE
|
|---|
| |