Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4505 |
Symbol | |
ID | 1044016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 5118225 |
End bp | 5119565 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637147904 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_746615 |
Protein GI | 26991190 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0126885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCACTTGC GTTCACTGTT CTGGCGCATC CTGGCCAGTT TCTGGCTGGC CATCACCCTG GTCGCAGGCC TGTCGATCCT GCTGGGGCAC ATGCTCAACC AGGACGCCTG GATCCTCAGC CGTCACCCGG GCCTGAATAC CCTGGCCAGC AAGTGGACCA AGCACTACGA GCAGGAAGGC CTGGAGGCGG CCCAGCACTT TCTGGAACGA CGCAAGAACC GCTACAAGAT CGACGTGCAG GTGCTCGACG ATAGCGGTGA AGCCGTGGTG CCCGGTACCT TCCCACGCCG TGCGGCAGCC CTCGAAGCGC GCCAGCACAA TGACCAGCGG CGCTTGCCAT GGCGCCGGCT GACCGAGGAA TACACCAGCC CCGACACCGG CGAAACCTAC TTGCTGATCT ACCGCATCCC TCACCCGGCG CTGGATGCCT GGCACCGCGA GAGCCTGCTT TGGCCGCTCA GCGCACTGGG CATTGCCTTG GTCGTGCTGA CCCTGTTCAG CCTGCTGGTG ACGCTGTCCA TTACCCGCCC GCTAAGCCGC CTGCGCAGTG CCGTACACGA CCTGGGCCAG ACCACCTATC AGCAGAACAG CCTGGCACGG CTGGCAGCGC GGCGCGACGA GTTTGGCGTG CTGGCCAAGG ACTTCAACAA GATGGGCGCA CGCCTGCAAA GCACCATTGG CAGCCAGCGC CAGCTGCTAC GCGACGTGTC CCACGAACTG CGCTCGCCAC TGGCCCGGCT GCGCATCGCC CTGGCCCTGG CCGAACGCGC CGAGCCTGAG CAGCGGCAAG CGCTGTGGCC GCGCCTGACC CGCGAATGCG ACCGCCTGGA AGACCTGATC AGCGAAATCC TCGCCCTGGC CCGGGTGGAT GCCGAACAAG CCCATGCCGA ACCGGTCGAC CTCAATGCCC TACTCGGCAG CGTGCGCAAG GACGCCCTGC TGAGCGCGCC GGATCAGGAC GTGCGCCTGG AGGCGCAGCC AGGTTTGAGC TTGCAGGGTT GGCCAACGCT GATCGAGCGT GCCGTTGACA ACCTGCTGCG CAATGCCCTG CGCTTCAACC CGGCGGGCCA GCCGGTCGAG GTCAGCGCCG CGCGCGAGCA GGACCGCATC GTGATCAGCG TGCGTGACCA TGGGCCTGGG GCGGCAGAGG AGCACCTGGC GCAACTGGGT GAGCCGTTCT TCCGCGCGCC GGGGCAGGAA GCGCCGGGGC ATGGCCTGGG GCTGGCGATT GCGCGCAAGG CAGCGGAGCG CCATGGCGGT AGCCTGATGC TGGAGAATCA TCCACAGGGT GGGTTTGTGG CCAGGCTGGA GTTGCCCTTG GCTGGAGCGG CAGGCAGTTG A
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Protein sequence | MHLRSLFWRI LASFWLAITL VAGLSILLGH MLNQDAWILS RHPGLNTLAS KWTKHYEQEG LEAAQHFLER RKNRYKIDVQ VLDDSGEAVV PGTFPRRAAA LEARQHNDQR RLPWRRLTEE YTSPDTGETY LLIYRIPHPA LDAWHRESLL WPLSALGIAL VVLTLFSLLV TLSITRPLSR LRSAVHDLGQ TTYQQNSLAR LAARRDEFGV LAKDFNKMGA RLQSTIGSQR QLLRDVSHEL RSPLARLRIA LALAERAEPE QRQALWPRLT RECDRLEDLI SEILALARVD AEQAHAEPVD LNALLGSVRK DALLSAPDQD VRLEAQPGLS LQGWPTLIER AVDNLLRNAL RFNPAGQPVE VSAAREQDRI VISVRDHGPG AAEEHLAQLG EPFFRAPGQE APGHGLGLAI ARKAAERHGG SLMLENHPQG GFVARLELPL AGAAGS
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