| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4499 |
|---|
| Symbol | |
|---|
| ID | 1041849 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 5114280 |
|---|
| End bp | 5114945 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637147898 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | NP_746609 |
|---|
| Protein GI | 26991184 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.255855 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCC TTTGGCGCTA TGAACAGGAC GATTACGTGA GCCAATTTTT CCAGATTCAT
CCGGAGAACC CACAAGCGCG CCTGATAAAA CAGGCCGTCG AGATCATCCG CAAGGGGGGC
GTGGTGGTGT ATCCGACGGA TTCGGCGTAT GCGCTGGGTT GCCAGATAGG CGACAAGTCG
GCAATCGAGC GGGTGCGGCG CCTGCGCGGG CTGGACAAGA CGCACAACTT CACCCTGATG
TGCTGCGACA TGTCGCAACT GGGGTTGTAC GCCAAGGTCG ACACCGGCAC CTTCCGCTTG
CTGAAGGCGC ATGTGCCGGG GCCTTACACC TTCATCCTCA ACGGCACGCG TGAAGTGCCG
CGCCTGCTGT TGCACGATAA GCGGCGTACC ATCGGGCTGC GTGTACCGGA CCATGCCATC
ACCCTGGCCT TGCTGGCCGA GTTGGGCGAG CCACTGATGA GCGTCAGCCT GATCCTGCCG
GGCGACAGCG AGCCGATGAC CGACCCTTAC GAGATCCGTG AACGGCTGGA GCACCATGTT
GACCTGGTGA TCGATGGCGG GTTCGGCGAC CTCAAGGCGT CGACCATCAT CGACCTGTCC
GGCGACGAAC CGGAACTGAT CCGCGAAGGT TGTGGCGACC CCACGCCATT CCTGGTCAAC
GCGTGA
|
|---|
| Protein sequence | MNSLWRYEQD DYVSQFFQIH PENPQARLIK QAVEIIRKGG VVVYPTDSAY ALGCQIGDKS
AIERVRRLRG LDKTHNFTLM CCDMSQLGLY AKVDTGTFRL LKAHVPGPYT FILNGTREVP
RLLLHDKRRT IGLRVPDHAI TLALLAELGE PLMSVSLILP GDSEPMTDPY EIRERLEHHV
DLVIDGGFGD LKASTIIDLS GDEPELIREG CGDPTPFLVN A
|
|---|
| |