Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4482 |
Symbol | |
ID | 1043797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 5092639 |
End bp | 5093619 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637147882 |
Product | AraC family transcriptional regulator |
Protein accession | NP_746593 |
Protein GI | 26991168 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.821893 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCC AGCGAATCGG TTTTCTCATC TGGCCCAGCA CCAGGCCTTT GACCCTGGCG TTGGCCGAGG AAGTGTTGCT GGTGGCGCAG CGTGTGCATC CGGATGTGGT CTACGAGTTG GTCTTCCTGC AGGCCGAGCC TGCGCAGGAA GGCGCCTGGC GGCTGCCGGG CGAGCCGTGG ACCGGCCGCC TGGAGGGCTG CCACAAGCTC TTTCTGCTGG CCGACGAGCC GCCTGCGGCG ATGGGGGCTG CCTTTTCAGC GGCGCTCAAG CAACTGGCGC GCAGTGGTTG CCTGATCGGT GGCCTGTCGG CCGGGGTGTA TCCGCTGGCA ATGCTGGGCC TGCTCGATGG GTACCGGGCA GCCGTGCACT GGCGCTGGCA GGATGACTTT GCCGAACGCT TCCCCAAGGT GATTGCCACC AGCCACCTGT TCGACTGGGA TCGCGACCGA CTGACCGCCT GCGGCGGTAT GGCCGTGACC GACCTGCTGC TGGCGGTGCT GGCGCGCGAT CACGGGGCGG AGCTGGCCGG GGCAGTGTCG GAAGAGCTGG TGGTAGAGCG CATCCGCGAG GGTGGCGAGC GCCAGCGTAT TCCGCTGCAG AACCGCCTGG GCTCGAGTCA CCCCAAGCTG ACTCAGGCCG TGTTGCTGAT GGAAGCCAAC ATCGAAGAGC CGCTGACCAC CGACGAAATC GCCCAGCATG TGTGTGTGTC GCGTCGGCAG TTGGAGCGTA TCTTCAAGCA GTACCTGAAC CGCGTGCCCA GCCAGTACTA CCTGGAGTTG CGGTTGAACA AGGCGCGGCA GATGCTGATG CAGACCAGCA AGTCGATCAT CCAGATCGGG CTGTCCTGTG GCTTCTCCTC GGGGCCGCAT TTTTCCAGTG CCTACCGTAA TTTCTTTGGT GCAACGCCGC GGGAAGACCG CAATCAGCGT CGCAGCAGCA GCCCGTTTGA ATTGAGCTCG GCGCCGGCTG AAAAGGGCTG A
|
Protein sequence | MTTQRIGFLI WPSTRPLTLA LAEEVLLVAQ RVHPDVVYEL VFLQAEPAQE GAWRLPGEPW TGRLEGCHKL FLLADEPPAA MGAAFSAALK QLARSGCLIG GLSAGVYPLA MLGLLDGYRA AVHWRWQDDF AERFPKVIAT SHLFDWDRDR LTACGGMAVT DLLLAVLARD HGAELAGAVS EELVVERIRE GGERQRIPLQ NRLGSSHPKL TQAVLLMEAN IEEPLTTDEI AQHVCVSRRQ LERIFKQYLN RVPSQYYLEL RLNKARQMLM QTSKSIIQIG LSCGFSSGPH FSSAYRNFFG ATPREDRNQR RSSSPFELSS APAEKG
|
| |