| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4453 |
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| Symbol | |
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| ID | 1046189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5052616 |
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| End bp | 5054448 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637147846 |
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| Product | opine ABC transporter, ATP-binding protein, putative |
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| Protein accession | NP_746564 |
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| Protein GI | 26991139 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000737861 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGGAT CGCTTCCGTT GAACCAAGAG ACTGTTCTGG AAGTTACAGG ACTTAACGTC
GCATTCCGGC GAGGCGGTGG CTGGTCTCCA GTCGTCAAAG ACCTCAGCTT TCGTGTCGCG
CGAGGCGAGA CGCTGGCGAT CGTGGGCGAA TCAGGCTCGG GCAAAAGTGT TTCTGCGATG
TCCATCCTGG GACTGCTGCC AGCTAATACG TCACAGGTGA CTGGAAGCAT CCGGTTGCAG
GGCCAGGAAT TGCTATGCCT GCCTGAGCCG GAGATGGCGG ATATCCGTGG AAATCGGATT
GCGATGATCT TCCAGGAACC AATGACTTCG CTGAATCCGG TCATGACCAT CGGTGAACAG
ATTGCTGAGC CACTGCGGTT ACACCGAGGG CTCGATGCGA CCCAGGCAAA GGAAGAAGCG
CTGAAGCTGA TGGAGCGGGT TCGCATCCCC GCTGCCCAAG AGCGGTATGA CGACTACCCG
CATCAGTTTT CGGGAGGAAT GCGTCAGCGC GTCATGATCG CGATGGCGTT GGCCTGCAAT
CCCGCAGTGT TGATCGCCGA CGAGCCGACC ACAGCCCTTG ATGTGACCAT CCAGGCGCAA
ATCCTGGAGT TGATCAAGGA ATTGCAGGCG CAAGAGCACA TGGCGGTTGT GTTCATCACT
CATGATATGG GCGTGGTTGC CCAGATAGCA GATCGTACAT TGGTCATGTA TCGCGGCGAT
CTGGTAGAGA CAGCTTCCAC ATCGGAGATT TTTTCGGCGC CTCAGAAGCC GTATACAAAA
GCGCTTTTGT CTGCAGTGCC CGAGCTCGGA TCAATGGCAG CTGAACCGTC GCCTAAGCCG
TTTCCGATCT ATGACATGGC CGCTGGAAGC AATGTCCCTG CACCCGAGAT GAAAGACAGT
GTGCGTCATA CCAAACCCTA CCTCCTGGAG GTGTCTGGCC TCACAACTCG GTTTGATGTG
CGGTCTGGTT TTTTCAAGCG TGTCACTGGC CGAGTGCATG CGGTCGAAAA CGTGAGTTTC
AATCTTAGCC AAGGTGAAAC ACTTGCAATT GTTGGGGAGT CCGGATGCGG CAAATCGACG
ACTGGACGGC TCATCACGGG GCTCCTTGAT CCAACCCATG GATCAGTCAA GTTGGAGGGT
GTCGAGCTAG GGTCTATCAC GCCAATGGAG CGTGCCAGGA AGATCCAGAT GGTCTTCCAG
GATCCTTATT CGAGCCTGAA TCCACGGCAG ACTGTAGCTC AATCGATCAT TGAGCCGCTC
AGAGTGCATG GGCTTTACGA TGCCAAGCGA TGTGAAGAGG TCGCCATTGA GTTGCTCGTA
AAAGTGGGGC TGCCCGCCGA TGCTGCTTGG CGCTTGCCGC ACGAGTTCTC TGGCGGGCAG
CGTCAACGTG TGTGCATCGC TCGGGCTCTG GCGTTGAGAC CAGGCACGAT TGTCGCTGAC
GAGGCGGTTT CGGCCTTGGA TGTATCGGTA AAAGTCCAAA TTGTGAATCT GTTGCTCGAG
TTGCAACAAG AGCTGGGCTT GGGCTTCATA TTCATTAGCC ATGACATGGC AGTAGTTGAG
CGTGTGAGCC ACCGAGTGGC GGTGATGTAC ATGGGGGAAA TAGTCGAGAT TGGGCCTCGT
GCCGCAATCT TTAACGATCC TAAACATCCC TATACACGCC GTTTGATTGA CGCAGTACCT
ATTCCTGACC CTGCACGAAA GCAGGTGCAG CGAGTGTCTG CCGGTACTTT GAGAACTCCG
TATAAAGCGC ATGATTTCAT TCCTCCGGCA CGGGTGTATC ACCAAGCCGG GGAGGGTCAC
TTTTACATGG AGCCCGAAGG CGAATGGTGC TGA
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| Protein sequence | MNGSLPLNQE TVLEVTGLNV AFRRGGGWSP VVKDLSFRVA RGETLAIVGE SGSGKSVSAM
SILGLLPANT SQVTGSIRLQ GQELLCLPEP EMADIRGNRI AMIFQEPMTS LNPVMTIGEQ
IAEPLRLHRG LDATQAKEEA LKLMERVRIP AAQERYDDYP HQFSGGMRQR VMIAMALACN
PAVLIADEPT TALDVTIQAQ ILELIKELQA QEHMAVVFIT HDMGVVAQIA DRTLVMYRGD
LVETASTSEI FSAPQKPYTK ALLSAVPELG SMAAEPSPKP FPIYDMAAGS NVPAPEMKDS
VRHTKPYLLE VSGLTTRFDV RSGFFKRVTG RVHAVENVSF NLSQGETLAI VGESGCGKST
TGRLITGLLD PTHGSVKLEG VELGSITPME RARKIQMVFQ DPYSSLNPRQ TVAQSIIEPL
RVHGLYDAKR CEEVAIELLV KVGLPADAAW RLPHEFSGGQ RQRVCIARAL ALRPGTIVAD
EAVSALDVSV KVQIVNLLLE LQQELGLGFI FISHDMAVVE RVSHRVAVMY MGEIVEIGPR
AAIFNDPKHP YTRRLIDAVP IPDPARKQVQ RVSAGTLRTP YKAHDFIPPA RVYHQAGEGH
FYMEPEGEWC
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