| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4428 |
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| Symbol | |
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| ID | 1043895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 5023079 |
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| End bp | 5023933 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637147823 |
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| Product | amino acid ABC transporter, periplasmic amino acid-binding protein |
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| Protein accession | NP_746541 |
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| Protein GI | 26991116 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR02995] ectoine/hydroxyectoine ABC transporter solute-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000544418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAACTTGG TCACTTCGCT TTCCGCAGTC GCTCAACGCC TGACCCTGGC GTGTGCCATT
GCGAGCATCG CCGTATCCGC ACACGCAGCT ACAACCCTCG ACTCTCTCAA AGAGCAGGGC
AGTGTTCGGA TTGGCTATGC CAACGAAACG CCTTTCGCCT ATACCGGAAC CGATGGAAAA
GTCACGGGCG AGTCGCCTGA AATCGCCACC GCGATTTTCA AGCAGTTGGG GATCAAGGAC
GTCAATGGTG TACTCACCGA ATGGGGATCG CTGATTCCTG GCCTGCGAGC TGGTCGTTTC
GATGCTATCG CAGCCGGCAT GTACATCACT CCAGCCCGCT GCAAGCAGGT CTTGTTCACC
GACCCTCACT ACCAGCTCCC TGACGCGCTC CTGGTGCCGA AAGGCAATCC CAAGGAGCTG
TTCAGCTACG AAGATGTCGC AAAGAACCCA GAAGTGAAGC TGGCCATTAT GGCGGGCACC
GTGGAGCTCC AGTACGCCCG TGACTCTGGC GTGAAAGACG AACAAATCCT CCAGGTTCCA
GATACCACGG CTCAGCTGCA GGCAGTTCGT GCCAAGCGGG CAGATGCTGC TGTAGGCACA
CAGCTCACGA TGAAAGGGCT CGCGGCCAAA GGCGGTGATT CGGTAGAGGC CATGACCGAC
TTCAAAGATG ACCCTTCCCA TATCGGCTAC GGTGCCTTGG CCTTCAGACC GGAAGACAAG
GAGCTTCGTG ACCAGGTCAA TGCCCAGCTC AAGAAATGGC TCGGTAGTGA AGAACACCTG
AAAACAGTGG CGCCATTCGG ATTCGACAAG AGCAACCTCA CTACGAAAAC AGCTGCGGAG
CTCTGCGGGC AGTAA
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| Protein sequence | MNLVTSLSAV AQRLTLACAI ASIAVSAHAA TTLDSLKEQG SVRIGYANET PFAYTGTDGK
VTGESPEIAT AIFKQLGIKD VNGVLTEWGS LIPGLRAGRF DAIAAGMYIT PARCKQVLFT
DPHYQLPDAL LVPKGNPKEL FSYEDVAKNP EVKLAIMAGT VELQYARDSG VKDEQILQVP
DTTAQLQAVR AKRADAAVGT QLTMKGLAAK GGDSVEAMTD FKDDPSHIGY GALAFRPEDK
ELRDQVNAQL KKWLGSEEHL KTVAPFGFDK SNLTTKTAAE LCGQ
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