Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4389 |
Symbol | flgD |
ID | 1041827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4981978 |
End bp | 4982679 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637147785 |
Product | flagellar basal body rod modification protein |
Protein accession | NP_746503 |
Protein GI | 26991078 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.459754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA CCAATTCCAC TACAGACGTC GGCAGCGCAT ACCTGACCTC GCTGCAGAAG CAGACGTCCA AGACTGACAG CTCTACCGGC GCCGCCGGCA GCGCGCTGGG CAAGGACGCG TTCCTGCAGT TGCTGGTCAC CCAGATGCAG AACCAGAACC CGCTCGACCC GCAGGAAAAC GGCGAGTTCG TGGCCCAGTT GGCGCAGTTC AGCAGCCTGG AAAGCATGCA GTCGCTGAAC GACGCTGTGA CCTACATCGC GGCCGGGCTG CAATCTTCCC AGGCCTTGCA GGCCTCCTCG CTGGTCGGGC GCAATGTCAT TGTCCAGACC GACAAGGCTG TGGTCGATAC CAGCAAGGAC ATGAAGGGCT CGGTCAACCT GACGTCGTCC AGTACCTCCA CCTCGGTGGG GATCTACGAC AAGGACGACA AGCTGGTGCG CACCATCGAA CTCGGTACCC AGAAGTCTGG CAGCATCGAC TTTACCTGGG ATGGCCTGAA CGATGACGGT GAAGTCGCGG CCGCCGGGAC CTACACCTTC AAGGCCACCG CCTCGATCGA TGGCAAGGCC ACGGCCATGA CCACCAACCT GCCGGCCTCG GTTACCAGTG TGACCATGGG TAGCAACGGT TCGGAGATGA CGCTCAACCT GGCCGGGCTG GGCAGTGTTG CGCTTTCCAA AATCCAAAGC ATCGGCATCT AG
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Protein sequence | MTTTNSTTDV GSAYLTSLQK QTSKTDSSTG AAGSALGKDA FLQLLVTQMQ NQNPLDPQEN GEFVAQLAQF SSLESMQSLN DAVTYIAAGL QSSQALQASS LVGRNVIVQT DKAVVDTSKD MKGSVNLTSS STSTSVGIYD KDDKLVRTIE LGTQKSGSID FTWDGLNDDG EVAAAGTYTF KATASIDGKA TAMTTNLPAS VTSVTMGSNG SEMTLNLAGL GSVALSKIQS IGI
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