| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4364 |
|---|
| Symbol | |
|---|
| ID | 1042527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4954439 |
|---|
| End bp | 4954744 |
|---|
| Gene Length | 306 bp |
|---|
| Protein Length | 101 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637147760 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | NP_746478 |
|---|
| Protein GI | 26991053 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.557129 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTCG AGACTGATTT TTCGCAGGAC GGGAAAAAGC TGACCATCAA GATCAAGGGG
CGCTTCGATT TCGGCAAGCA TCAGGAGTTT CGCGACGCCT ACGAACGCCA GCCCAGGCGG
CCGGATTCGG TGGTCGTCGA CCTGAAGGAC ACCACCTACC TCGACAGCTC CGCGCTCGGC
ATGCTGCTGT TGCTGCGCGA CCACGCGGGC GGCGACGAGT CGGATGTGCG GGTAGTGCAT
GCCAGCTCCG ATGTGCGCAA GATTCTCGCC ATCTCCAATT TCGAAAAACT CTTCGATATC
AGTTGA
|
|---|
| Protein sequence | MAVETDFSQD GKKLTIKIKG RFDFGKHQEF RDAYERQPRR PDSVVVDLKD TTYLDSSALG
MLLLLRDHAG GDESDVRVVH ASSDVRKILA ISNFEKLFDI S
|
|---|
| |