Gene PP_4270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4270 
Symbol 
ID1046095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4855221 
End bp4856027 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content61% 
IMG OID637147668 
Producthypothetical protein 
Protein accessionNP_746386 
Protein GI26990961 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGAAGAC TGCTGGCCCT GTTACTGCTG TGGTCTACAA ACAGCCTGGC TGACCAGCCG 
GTGCTGCGCT TCTCCGTAGC CGAGAGCTGG AGCATGCCCC TGGTACGCAT CGAAGGCGAT
CAGCCAGTGG AGGGATTGCT TTACGACCTG ATGCAAGCCG TTGCCAGGCA AGTGGGCGCT
CGCCCCGAGT TCCACGTCAT GGCCCGCCTG CGCCTGGAGG AGGCCATGAG CAGCGGCGAT
ATTGATGTGC GTTGCTACGT CAGTACCCAG TGGCTCAACG ACCGTCCAAG GGATTTTGTG
TGGAGTATCC CGCTGATTCA TCAGCGCGAC GTACTGGTTG GCCGCCCCGG CGACAGCACC
CCGATGCCCC CGGAGCAACT GCCACCCCAG GCGATCGGCA CGGTGCTGGG CTACACCTAT
TCAACCCTGC AACCACTGCT GGACCACGGC CAGTTGCACC GTGAGGACAG CCGCAACCAG
TTGCTGGTAC TGCAAAAGCT GCAGGCCGGC CGGTATCGCC ATGCGGTGAG CAACCAGTTG
TCGTTGCAGT GGTTCAACCA AGGGTTGCCA GCGGAGCAGC AATTGCAAGC GCTGGCGGTG
CTGGACGAAC AGGATTTGGG GTGCATGGTG CGCAACGATC CGGCGATACC GACACAAGGG
CTGTTGCGGG CGTTGGTAAG GATGAAGCAG TCGGGGGAGA TAGAGCGGAT TTTGCAGCGG
TATGAAGCGA CGGGCGACCC GGACAGTATG TCTGTGGCCC GGCCCGAAAT ACCCAGCAAA
ATGCCGGCAC ACAGCCAGCG CAACTAA
 
Protein sequence
MRRLLALLLL WSTNSLADQP VLRFSVAESW SMPLVRIEGD QPVEGLLYDL MQAVARQVGA 
RPEFHVMARL RLEEAMSSGD IDVRCYVSTQ WLNDRPRDFV WSIPLIHQRD VLVGRPGDST
PMPPEQLPPQ AIGTVLGYTY STLQPLLDHG QLHREDSRNQ LLVLQKLQAG RYRHAVSNQL
SLQWFNQGLP AEQQLQALAV LDEQDLGCMV RNDPAIPTQG LLRALVRMKQ SGEIERILQR
YEATGDPDSM SVARPEIPSK MPAHSQRN