| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4261 |
|---|
| Symbol | |
|---|
| ID | 1041698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4845076 |
|---|
| End bp | 4847724 |
|---|
| Gene Length | 2649 bp |
|---|
| Protein Length | 882 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637147659 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | NP_746377 |
|---|
| Protein GI | 26990952 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAAGC CCTGCAAGGC GCCGAACACC AACAGTAGCA ACACCGCAAA TCCCTGTGGG
AGCGGGCACG CCCGCGAATG CGATAGCTCA GGCAAAGGTA TTTCCAGGTC TGACGCATTC
GCGGGCGCGC CCGCTCCCAC AGGGTTTCCT ATCTGCCTGA GCAGTGTCTG CCCTATGACC
CAACCGACCC CCTGCTACCA CTGCGCCCTG CCCGTCCCCA CCGGCAGCCG CTTCACCGCC
GTGGTCCTCG GCCAGCCCCG GCAGTTCTGC TGCCCCGGCT GTCAGGCGGT GGCCGAGTCG
ATCGTCGCTG GAGGCCTGGA ACATTACTAC CAACACCGCA GCGACAACAG CGCCAACCCC
GAAGCCCTGC CCAAACAACT ACAGGACGAA CTGGCCCTGT ACGACCGCAG CGACGTGCAG
CAAACCTTCG TCCGCCACCA GGGTGAGCTG GCCGAAACCA CCTTGCTTGT CGAGGGCATC
AGCTGCGCCG CCTGCGGCTG GCTGATCGAA AAGCACCTGC GCAACCTGCC CGGTGTCGCC
GAAGCGCGCC TGAACCTGTC CAATCACCGC CTGCTGCTGA ACTGGGATGA CAAGCAGCTA
CCGCTGTCGC GCCTCCTCGC CGAACTTCGC CAGATCGGCT ACGCCGCCCA CCCCTACCAG
CCTGACCAGG CCGCCGAGCA ATTGGCCCGG GAAAACCGCA GCGCCCTACG CCGCCTGGGC
GTGGCCGGGC TGCTGTGGTT CCAGGCGATG ATGGCGACCA TGGCCACTTG GCCGGAATTC
AACATCGACC TGACACCCGA GTTGCATGCC ATCCTGCGCT GGGTGGCGCT GTTCCTGACA
ATTCCCATCG TGTTCTACAG CTGCGCGCCC TTCTTCAAGG GCGCGGCGCG CGACTTGCGA
ACGCGCCACC TGACCATGGA CGTTTCGGTG TCGCTGGCCA TTGGCCTGGC GTTCGGTGCC
GGCATCTGGA CAGCCATCAC TGGCAGCGGC GAGCTTTATT TCGACACGGT GGGCATGTTC
GCCCTGTTCC TGCTGACCGG CCGCTACCTG GAGCGCCGCG CCCGCGAGCG CACAGCGGCG
GCCACTGCAC AGCTGGTCAA CCTGCTGCCA GCCTCATGCC TGCGCCTGGA CGCCATCGGG
CGCAGCGAAC GCATCCTGCT CAGCGAGTTA CAGTGCGGCG ACACCGTGCA GGTGCTGCCC
GGCGCGGTCA TCCCTGCCGA CGGGCGCATC GTCGAGGGCC GCTCCAGCGT CGACGAATCG
CTGCTGACCG GCGAGTATCT GCCGCAACCA CGCCGGGTGG GTGAGCGGGT CACTGGCGGT
ACGCTGAACG TTGAAAGCGC GCTGAATGTG GAAGTGGAAG CCCTCGGCCA TGACTCACGC
TTGTCGGCCA TCGTCCGCCT GCTGGAACGC GCCCAGACCG AAAAACCGCG CCTGGCGGAA
ATCGCCGACC GCGCCTCGCA GTGGTTCCTG CTGTTCTCGC TGCTGGCCGC CGTTGCCATC
GGCCTGTGGT GGTGGCACCT GGACCCGACA CGGGCGTTCT GGATCGTACT GGCCATGCTC
GTGGCCACCT GCCCTTGTGC CCTGTCTTTG GCTACGCCAA CCGCACTGAC CGCCGCCACC
GGAACCCTGC ACAAGCTTGG CCTGCTGGTG ACCCGCGGCC ACGTGCTGGA AGGCCTGAAC
CAGATCGACA CGGTGATCTT CGACAAGACC GGCACACTGA CCGAGGGCCG CCTGACCTTG
CGCAGCATCC GCCCGCTCGG CAGCCAGGCC GCCGACCGCT GCCTGGCCCT GGCCGCGGCG
CTGGAAAACC GCTCTGAACA CCCCATCGCT CGCGCCTTTG GTCGTACCGC CACACCTGCC
GATGACGTAC AGAGCGTACC CGGCCTGGGC CTGGAGGGGG TGGTCGACGG CCAGCGCCTG
CGCATTGGTC AGGCTACCTT CGTCTGCGCC TTGAGTGGTG CGGAAATCCC CGCTGTACCC
GAGCCGCGCG GCCAGTGGCT GCTGCTGGGC GACCGCCAGG GGCCACTGGC CTGGTTCGGC
CTGGATGACC GCCTGCGCGA CGATGCCCCG GCCCTGCTCG CTGCCTGCAA GGCGCGGGGC
TGGCACACCC TGCTGCTGTC GGGCGACAGC TCGCCGATGG TTGCCGAAGT GGCCGCGCAG
CTGGGTATCG ACCAGGCCAT TGGCGGCCTG CGCCCGGATG ACAAACTGGA CCGCCTGAAA
GCCCTGCAGG CTGACGGGCG CAAGGTGCTG ATGCTCGGCG ACGGGGTCAA CGATGTACCG
GTACTGGCCG CCGCCGATAT CAGCATCGCC ATGGGCAGCG CCACCGACCT GGCCAAGACC
AGTGCCGACG CCGTCTTGCT GTCCAACCGC CTGCAAGCGC TGGTGCAGGC GTTCGAGCTG
GCCCGCCGCA CCCGCCGCAA CATCCTCGAG AACCTGCTGT GGGCGACCCT GTATAATGGC
CTGATGTTGC CGTTCGCCGC GCTCGGCTGG ATCACGCCGG TGTGGGCCGC CATCGGCATG
TCGGTCAGCT CGCTGATCGT GGTGCTCAAC GCCCTGCGCC TGACCCGAAT GCCCGTGGCC
TCGGGCCCGC TGCCCCACGA AGCCCCTTTA CCCGGGAGGA AGTCGCCATG CCCGCCCTCT
ATGTCATGA
|
|---|
| Protein sequence | MTKPCKAPNT NSSNTANPCG SGHARECDSS GKGISRSDAF AGAPAPTGFP ICLSSVCPMT
QPTPCYHCAL PVPTGSRFTA VVLGQPRQFC CPGCQAVAES IVAGGLEHYY QHRSDNSANP
EALPKQLQDE LALYDRSDVQ QTFVRHQGEL AETTLLVEGI SCAACGWLIE KHLRNLPGVA
EARLNLSNHR LLLNWDDKQL PLSRLLAELR QIGYAAHPYQ PDQAAEQLAR ENRSALRRLG
VAGLLWFQAM MATMATWPEF NIDLTPELHA ILRWVALFLT IPIVFYSCAP FFKGAARDLR
TRHLTMDVSV SLAIGLAFGA GIWTAITGSG ELYFDTVGMF ALFLLTGRYL ERRARERTAA
ATAQLVNLLP ASCLRLDAIG RSERILLSEL QCGDTVQVLP GAVIPADGRI VEGRSSVDES
LLTGEYLPQP RRVGERVTGG TLNVESALNV EVEALGHDSR LSAIVRLLER AQTEKPRLAE
IADRASQWFL LFSLLAAVAI GLWWWHLDPT RAFWIVLAML VATCPCALSL ATPTALTAAT
GTLHKLGLLV TRGHVLEGLN QIDTVIFDKT GTLTEGRLTL RSIRPLGSQA ADRCLALAAA
LENRSEHPIA RAFGRTATPA DDVQSVPGLG LEGVVDGQRL RIGQATFVCA LSGAEIPAVP
EPRGQWLLLG DRQGPLAWFG LDDRLRDDAP ALLAACKARG WHTLLLSGDS SPMVAEVAAQ
LGIDQAIGGL RPDDKLDRLK ALQADGRKVL MLGDGVNDVP VLAAADISIA MGSATDLAKT
SADAVLLSNR LQALVQAFEL ARRTRRNILE NLLWATLYNG LMLPFAALGW ITPVWAAIGM
SVSSLIVVLN ALRLTRMPVA SGPLPHEAPL PGRKSPCPPS MS
|
|---|
| |