Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4215 |
Symbol | |
ID | 1042529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4762663 |
End bp | 4763568 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637147614 |
Product | hypothetical protein |
Protein accession | NP_746332 |
Protein GI | 26990907 |
COG category | [S] Function unknown |
COG ID | [COG1262] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.579009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGATG ATGCACGCCT CACCTCATCC CCCCGGTTCA CGCCTCGCTT GCGCCACTTG TGCTGCCTGG CCGTGCTTGG TCTGGGCGCC GCCAGTGCCC AGGCCGCCAG CCAGCCCACC CCAGGCGAAG TCTTCCGCGA CTGCAAGGCG GCCTGCCCGG AAATGGTGGT GCTGCCCGCC GGCAGCTTCG TGATGGGTAC GCCCGAGGAT GAGCCCGGGC GCGAGGGCGA TGAGGGTCCA CAGCACACCG TGACCTTTGC CAAACCATTC GCCATCAGCC GCTACCATGT CACCGCAGGC GAACTGGATG CCTATATCCG CGAGAGCGGG GTAAAGATCG CCGACGGCGA CACCCGCCCA GGGCGCTTCT GCGCCGCCAG CAAGCCGACC TACAAACAGG GCCCGCGCCA GCCTGCCGTG TGCGTGAGCT GGTTCGATGT CGAGCAATAC GCCAAGTGGC TGTCGAAAAA AACCGGCCAC ACCTATCGCA TGATCAGCGA AGCCGAGCGC GAATATGCCG CGCGCGCCGG TTCAACCGGC CCGTTCCCCT TCCCCTTCGA TAACGGCGAC GCCTCCAGGT ACAGCATCGC CCAGCACGCC AACACCTACG GCCCCACCGA CGGTTACTCG TACACCGCCC CGGTCGGCAG CTACCCGGCC AATGCCTTCG GTGTCTACGA CATGCACGGC AACGTGTATG AGTGGACGGC CGACTGCTGG CACGACGGCT ACGACGGTGC GCCGAGCGAT GGCAGCGTCT GGTCCGGCGG CGACTGCAGT GTGCGAGTGA TGCGTGGCAA CGACTGGGGC GAAGCCCCGG TGTTCTCGCG CTCCGGCAAC CGCAACAACC GCGCACCCGA TGTGCGCGGC GATTTCCTCG GCTTCCGGGT CGCTCGCGAA CTCTGA
|
Protein sequence | MSDDARLTSS PRFTPRLRHL CCLAVLGLGA ASAQAASQPT PGEVFRDCKA ACPEMVVLPA GSFVMGTPED EPGREGDEGP QHTVTFAKPF AISRYHVTAG ELDAYIRESG VKIADGDTRP GRFCAASKPT YKQGPRQPAV CVSWFDVEQY AKWLSKKTGH TYRMISEAER EYAARAGSTG PFPFPFDNGD ASRYSIAQHA NTYGPTDGYS YTAPVGSYPA NAFGVYDMHG NVYEWTADCW HDGYDGAPSD GSVWSGGDCS VRVMRGNDWG EAPVFSRSGN RNNRAPDVRG DFLGFRVARE L
|
| |