| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4208 |
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| Symbol | |
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| ID | 1042476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4752892 |
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| End bp | 4753368 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637147607 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | NP_746325 |
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| Protein GI | 26990900 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.506383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAACATT ACTATCGTGA ACTGGTGAGC TTTCTGTCTG CACGCTTGGG TAGCCGTCAG
GCGGCGGAGG ACGTCGCTCA CGATGCTTAT CTGCGGGTCC TGGAGCGTAC TGGCAGCGAA
CAGATCGAGC ATCCGCGTGC GTTCTTGTAT CGAACCGCGC TGAACCTGGT TGTCGACCGG
CACCGGCGTC AGTTGGTGCG CCAGGCCGAG CCGCTCGATG CCCTGGATGC CGATAGTCGG
CTGCATAGCT CTGAGTTGCA GCATGACCTG CAGTTGGACC AGCGCCTGGC ACTGATGCAA
AAGGCCCTTG ATGAGTTGAG CAGGCCCTGC CGTGACAGTT TTCTGTTGCG CAAAATCGAG
GGGCTGTCCC ATCAGCAGAT CGCCGAGCGG CTGGGCATCT CGCGCAGCCT GGTGGAAAAG
CACATCGTCA ATGCCATGAA GCACTGCCGG GTGCGCATGC GGCAATGGGA ATCCTGA
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| Protein sequence | MEHYYRELVS FLSARLGSRQ AAEDVAHDAY LRVLERTGSE QIEHPRAFLY RTALNLVVDR
HRRQLVRQAE PLDALDADSR LHSSELQHDL QLDQRLALMQ KALDELSRPC RDSFLLRKIE
GLSHQQIAER LGISRSLVEK HIVNAMKHCR VRMRQWES
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