| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4193 |
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| Symbol | sdhC |
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| ID | 1042426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4738734 |
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| End bp | 4739120 |
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| Gene Length | 387 bp |
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| Protein Length | 128 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637147592 |
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| Product | succinate dehydrogenase, cytochrome b556 subunit |
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| Protein accession | NP_746310 |
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| Protein GI | 26990885 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.530712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAAAAAG CCGTGAAAAG CCAACGACCT GTAAACCTAG ACCTAAGGAC CATCAAGCTC
CCCGTCACTG CGTACACGTC CATCCTGCAC CGTATCTCCG GCGTCATCCT GTTCATCGGC
CTTGCCATCA TGCTTTATGC ACTGGGCAAG TCGCTGGGTT CCGAGGAAGG CTTCGGTGAG
GTGAAGGCGT GTCTGACCAG CCCGCTGGCC AAGTTCGTGA CCTGGGGCCT GCTGTCCGCC
CTGCTTTATC ACCTCGTGGC AGGTGTTCGT CACCTGATCA TGGACATGGG TATCGGTGAG
ACGCTGGAAG GCGGCAAGCT GGGCTCGAAA ATCGTGATCG TCATCTCCGT GGTGCTGATC
GTTCTGGTGG GAGTTTGGGT ATGGTAA
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| Protein sequence | MKKAVKSQRP VNLDLRTIKL PVTAYTSILH RISGVILFIG LAIMLYALGK SLGSEEGFGE
VKACLTSPLA KFVTWGLLSA LLYHLVAGVR HLIMDMGIGE TLEGGKLGSK IVIVISVVLI
VLVGVWVW
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