| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4188 |
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| Symbol | kgdB |
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| ID | 1042423 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4731536 |
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| End bp | 4732759 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637147587 |
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| Product | dihydrolipoamide succinyltransferase |
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| Protein accession | NP_746305 |
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| Protein GI | 26990880 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | [TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0301859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTATCG AGATCAAAGC CCCAACCTTC CCGGAATCGG TTGCCGATGG CACCGTTGCC
ACCTGGCACA AGAAGCCGGG CGAAGCCGTC AAGCGTGACG AGCTGATCGT CGACATCGAG
ACTGACAAGG TTGTCCTGGA AGTACTGGCT ACTGCCGATG GCGTGCTGGG CGACATCGTC
AAGGGCGAGG GCGACACCGT CCTGTCCGAC GAATTGCTGG GTTCGATCGT TGAGGGCGGT
GCTGCCGCTG CGCCTGCCGC GGCAGCCGCA CCTGCAGCTG CTCCGGCCGC TGCTGCCGCT
GACGCCGGCG AAGATGACCC GATCGCAGCC CCGGCCGCGC GCAAGCTGGC TGAAGAAAAC
GGCATCGACC TGGCTACCGT TGCAGGTACC GGTAAAGGCG GTCGCGTCAC CAAGGAAGAC
GTGGTTGCTG CTGTTGCCAA GAAGAAGTCG GCACCTGCCG CTGCACCGGC TGCCAAGCCT
GCCGCTGCTG CCGCTGCCCC GGTTGTCGTC GCCGCTGGCG ACCGTACCGA GAAGCGTGTG
CCGATGACCC GCCTGCGTGC CAAGATCGCC GAGCGCCTGG TCGAAGCCCA GTCGAACATG
GCGATGCTGA CCACCTTCAA CGAAGTGGAC ATGACCGAAG TCATGGCCCT GCGTTCGAAG
TACAAGGACC TGTTCGAGAA GACCCACAAT GGCGTGCGGC TGGGCTTCAT GTCGTTCTTC
GTCAAAGCCG CTACCGAAGC GCTGAAGCGC TTCCCGGCCG TCAACGCCTC GATCGACGGC
AACGACATCG TCTACCACGG CTTCGCCGAC GTCGGTGTTG CCGTGTCCAG CGACCGTGGC
CTGGTGGTGC CGGTGCTGCG TAACGCCGAG TCGATGAGCC TGGCTGAAAT CGAGAACGGC
ATCGCTACCT TCGGCAAGAA GGCCCGTGAC GGCAAACTGT CCATCGAAGA GATGACCGGT
GGCACCTTCA CCATCACCAA CGGTGGCACC TTCGGTTCGA TGATGTCGAC CCCGATCGTC
AACCCGCCGC AGGCCGCCAT TCTCGGCATG CACAACATCA TCCAGCGCCC GATGGCCATC
AATGGCCAGG TCGTGATTCG CCCGATGATG TACCTGGCGC TGTCGTACGA TCACCGCCTG
ATCGACGGCA AGGAAGCGGT AACCTTCCTG GTCACTATCA AGAACCTGCT GGAAGATCCG
TCCCGCCTGC TGCTGGACAT CTAA
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| Protein sequence | MAIEIKAPTF PESVADGTVA TWHKKPGEAV KRDELIVDIE TDKVVLEVLA TADGVLGDIV
KGEGDTVLSD ELLGSIVEGG AAAAPAAAAA PAAAPAAAAA DAGEDDPIAA PAARKLAEEN
GIDLATVAGT GKGGRVTKED VVAAVAKKKS APAAAPAAKP AAAAAAPVVV AAGDRTEKRV
PMTRLRAKIA ERLVEAQSNM AMLTTFNEVD MTEVMALRSK YKDLFEKTHN GVRLGFMSFF
VKAATEALKR FPAVNASIDG NDIVYHGFAD VGVAVSSDRG LVVPVLRNAE SMSLAEIENG
IATFGKKARD GKLSIEEMTG GTFTITNGGT FGSMMSTPIV NPPQAAILGM HNIIQRPMAI
NGQVVIRPMM YLALSYDHRL IDGKEAVTFL VTIKNLLEDP SRLLLDI
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