| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_4154 |
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| Symbol | |
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| ID | 1042319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4692322 |
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| End bp | 4695054 |
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| Gene Length | 2733 bp |
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| Protein Length | 910 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637147554 |
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| Product | hypothetical protein |
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| Protein accession | NP_746272 |
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| Protein GI | 26990847 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases
[COG2334] Putative homoserine kinase type II (protein kinase fold) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAGG CCTGCCACGG CAGCTACGCC CAACTGGAGC TTGAAGCCCA GCACGCCGCC
CTGGCCTTCC TGCGCGATCA AGGTTTGCCG GTACCCGCCG TGCGCTCAGC CCACAACGGC
ATGGGGTTGC TGGAACTGGA CATCGACGCG CAACCACTGC GCCTGCGCCT GCTCGATTAC
ATCGAAGGCC AACCGCTGAC CCGCCTCAAG CACATGGAGC CGCGCTTGAT GGCTGAACTG
GGCGGGCTCT GTGCAAAGCT GGACAAGGCG CTTGCCCATT TCGATCACCC GGGCCTTGCG
CGTACCTTGC AATGGGACCC GCAGCATGCC GGGGCACTGA TCGATCACCT GCTACCGGTG
CTGCAGGACG GCGGGCAGCG CGCCCGCATC GAACACGCCA CGCGACAGGC CAACGAGCAC
CTGATGCCGC TGGTCGATCA ACTGCCCAGT CAGGCCGTGC ACCTGGACAT CACCGACGAC
AACACCGTGT GGGCCCGTGA TGCCCAGCGT CAGTGGCAAC TGCAAGGCGT GATCGATTTC
GGCGACCTGC TGCGCACCTG GCGTATCGCC GACCTGTCGG TGACCTGCGC TGCGCTGTTG
CACCACGCCG AGGGCGACCC CCTGCGCATC CTGCCAGCCG TGCAGGCCTA CCAGGCGCTC
AACCCGCTGA CCGAAGCCGA ATTGCGCGCC CTGTGGCCGC TGGTGCTGAA CCGCGCTGCC
GTGCTGGTGC TGAGCAGCGA ACAACAGCTA ACCGTCGACC CGGGCAACCA GTACACCCGC
GACAACATTG CCCACGAATG GGAAATTTTC GACACGGCCA CCGCCGTGCC TTTCGCCCTG
ATGGAGGCGG CCATTCTGCA GGCTGCGGGC CTGCAACCCG CGGCGCCGGA CTGGAACGAC
TGTGCCCCCC TGCTCCCCGA GCTGGCCGGG CTGGCTGTCA CACGGGTGGA CCTGGGAGTA
CTCAGCAAAC ACTTCGAGGC CGGCAACTGG GAGCAACCCG GTTACGACCA GCATCTGCTG
ACTTCGCAAG CCGCCCCGGC CTGCAGCCTG CACGGGCAGT ATCGCCTGTC GCAAACCCAT
ATCGATCGCC CCGAGGAGCC CGCCACCTGC GCCCTTTTCG TCGAGCTGCA TGTGCCCAAC
GGCAGCCCGG TACAAGCGCC GGCAGCCGGC ACCTGGCAGC ACAGCGGCGA CGGCCGGGGC
TGCCTGCGCA CCCCGCATTG GGCTTTGTGG CTGCAAGGCC TGGAAGACGC ACCGGCAGAC
GGCCAGGCCG TGGAAAAAGG CCAGGCCCTG GGCAGCAGCT GCGGCTTCCT CAGCGTGCAG
GTATGCCTGG ACAATGGCAG CCAGCCGCCG CGCTTCGCCA CGCCGTCACA GGCCGCCGCC
TGGCTGGCCC TGTGCCCGTC ACCAGCCGCA CTGCTGGGCT TCGATTGCGA TGCCGAGCCG
CTACCCGATC CGCAAGCCCT GCTGGCCCGC CGCGATGCCA GCTTCGCCCG CTCGCAGAAG
CACTACTATG CGCAACCGCC GCACATTGAA CGTGGCTGGC GCAACTACCT GATCGATATG
CAGGGCCGTT CCTACCTGGA CATGCTCAAC AACGTCGCAG TGCTGGGCCA TGGCCATCCA
CGCATGGTTG CCGAGTCGGC GCGGCAGTGG TCGCTGCTGA ACACCAACTC GCGCTTCCAT
TACGCAGCAA TCACCGAATT CTCCGAGCGC CTGCTGGACC TGGCCCCCGA AGGTTTCGAC
CGGGTGTTCA TGGTCAACAG CGGCACCGAG GCCAACGACC TGGCGATTCG CCTGGCCTGG
GCCTACAGTG GCGGGCGCGA TCTGCTCAGT GTGCTGGAGG CCTACCACGG CTGGTCGGTG
GCCACCGATG CCATCTCCAC GTCGATCGCC GACAACCCGC AAGCCCTGGA AACCCGCCCG
GACTGGGTTC ACCCGGTCGA AGCACCGAAC ACCTTCCGCG GCCGCTTCCG CGGGGCCGAC
AGCGCCGCCG ACTACCTGCA AGACGTCGAC GCCAAGCTGG CTGACCTCGA CGCCCGTGGC
CGTCAGCTGG CGGGCATCAT CTGCGAACCG GTGTACGGCA ATGCCGGCGG TATCTCGCTG
CCCGCAGGCT ACCTGCGCGC AGCCTATGCC AAGGTCCGCG CCCGCGGCGG GGTGTGCATC
GCCGACGAAG TGCAGGTAGG CTATGGCCGC CTGGGCGAGT ACTTCTGGGG CTTCGAGGAA
CAGGGCGTGG TGCCGGACAT CATTACCATG GCCAAGGGCA TGGGTAACGG CCAGCCGCTG
GGCGTGGTCA TCACCCGTCG CGAAATCGCC GAGGCGCTGG AGGCCGAGGG CTACTTCTTC
TCCTCGGCCG GTGGCAGCCC GGTCAGTTGC CGCATCGGCA TGGCAGTGCT GGATGTCATG
CAGGAGGAAG GCCTGTGGGA CAACGCCCGT GACACCGGGC GCTACTTCAA GGCACGCCTG
CAGGCGCTGG TCGACAAGCA CCCGCTGGCC GGCGCGGCAC ATGGCTCGGG CTTCTACCTG
GGTCTGGAAC TGGTGCGCGA CCGCACCACC CTGGAGCCGG CCACCGAAGA AACCATGATG
CTGTGCGATC GCCTGCGTGA CCTGGGCATC TTCATGCAGC CGACCGGCGA TTACCTGAAC
ATCCTCAAGA TCAAGCCGCC GATGTGCACC AGCCGTGCGA GCGTGGACTA CTTTGTCGAC
AGCATTGACC GGGTGCTGGG CGAAGGTCTG TAA
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| Protein sequence | MLKACHGSYA QLELEAQHAA LAFLRDQGLP VPAVRSAHNG MGLLELDIDA QPLRLRLLDY
IEGQPLTRLK HMEPRLMAEL GGLCAKLDKA LAHFDHPGLA RTLQWDPQHA GALIDHLLPV
LQDGGQRARI EHATRQANEH LMPLVDQLPS QAVHLDITDD NTVWARDAQR QWQLQGVIDF
GDLLRTWRIA DLSVTCAALL HHAEGDPLRI LPAVQAYQAL NPLTEAELRA LWPLVLNRAA
VLVLSSEQQL TVDPGNQYTR DNIAHEWEIF DTATAVPFAL MEAAILQAAG LQPAAPDWND
CAPLLPELAG LAVTRVDLGV LSKHFEAGNW EQPGYDQHLL TSQAAPACSL HGQYRLSQTH
IDRPEEPATC ALFVELHVPN GSPVQAPAAG TWQHSGDGRG CLRTPHWALW LQGLEDAPAD
GQAVEKGQAL GSSCGFLSVQ VCLDNGSQPP RFATPSQAAA WLALCPSPAA LLGFDCDAEP
LPDPQALLAR RDASFARSQK HYYAQPPHIE RGWRNYLIDM QGRSYLDMLN NVAVLGHGHP
RMVAESARQW SLLNTNSRFH YAAITEFSER LLDLAPEGFD RVFMVNSGTE ANDLAIRLAW
AYSGGRDLLS VLEAYHGWSV ATDAISTSIA DNPQALETRP DWVHPVEAPN TFRGRFRGAD
SAADYLQDVD AKLADLDARG RQLAGIICEP VYGNAGGISL PAGYLRAAYA KVRARGGVCI
ADEVQVGYGR LGEYFWGFEE QGVVPDIITM AKGMGNGQPL GVVITRREIA EALEAEGYFF
SSAGGSPVSC RIGMAVLDVM QEEGLWDNAR DTGRYFKARL QALVDKHPLA GAAHGSGFYL
GLELVRDRTT LEPATEETMM LCDRLRDLGI FMQPTGDYLN ILKIKPPMCT SRASVDYFVD
SIDRVLGEGL
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