Gene PP_4100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4100 
Symbol 
ID1042218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4635815 
End bp4636204 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content61% 
IMG OID637147502 
ProductCro/CI family transcriptional regulator 
Protein accessionNP_746220 
Protein GI26990795 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.394089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0554933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGAA TCGGTATGCG GCTGCGGGAA GAACGTGAGC GGCTGGGTAT GACCCAGCGT 
GTATTTGGCG ATATCGGTGG GGTCGAGCCC AACGCTCAAG GCAAGTACGA AAGCGGTGAA
CGCACGCCGC GGCTAGATTA CCTGGCGGCA TTGGCGACCC GGGGCGTGGA TGCGTTGTAT
GTCCTCAGCG GCCTGCGCAC CCCGGCAGCG CACGAAGGTT TGAACACGGA TGAGTCCGGT
TTGCTGGGGG CTTTTCGGAA ATTGCGGTCG GATGATCAGG CGGCGCTCTT GCACCTTTTG
GGGCGGTTGG CCAACGACGC CAAGCCCCGG CAAATAGTGC GGCCGCTTAC TGTCGAACGT
CAGTCGTTTC TGAAGGAAGC AATGCGTTAG
 
Protein sequence
MNGIGMRLRE ERERLGMTQR VFGDIGGVEP NAQGKYESGE RTPRLDYLAA LATRGVDALY 
VLSGLRTPAA HEGLNTDESG LLGAFRKLRS DDQAALLHLL GRLANDAKPR QIVRPLTVER
QSFLKEAMR