Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4076 |
Symbol | |
ID | 1042173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4604168 |
End bp | 4604578 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637147482 |
Product | hypothetical protein |
Protein accession | NP_746201 |
Protein GI | 26990776 |
COG category | [S] Function unknown |
COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000287373 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.000000759929 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGTGGTT TCTTCGATCG CTTGATGGCG GACCCGTCCG CCATCCGGGA GGCGTCTCGC CAGGAAAGCG CTTCGCACAA GTTCGCGGCC ATCAAGTGCC ACCTCGAAAC GTTGCTGAAC GCTCGCCAAG GTTGCTCCCA GAGCAGCCCC GAGCTGGGCC TGCGCGACTT CAACGGGCAT GACGTCAGCA GCGGCGACCT GCTGCAGCAA GTGAGCGCCG ATATCCGCCG TACCCTCCAG CGCTTTGAAC CGCGCATCCA CGTGCGCGCG CTCAAAGCGG TACCGGATTG TCACGCCCCG TTGGAACTGC ATTTCAGGCT CGACTGCCAG GTGCAGGTCA ACAACCAGGC AGAGCAGTTG CAGCTTGAGC TGCTGGTAAA CGGACACAAC CGCTACACCC GAGTGAGGTG A
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Protein sequence | MSGFFDRLMA DPSAIREASR QESASHKFAA IKCHLETLLN ARQGCSQSSP ELGLRDFNGH DVSSGDLLQQ VSADIRRTLQ RFEPRIHVRA LKAVPDCHAP LELHFRLDCQ VQVNNQAEQL QLELLVNGHN RYTRVR
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