Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_4021 |
Symbol | est |
ID | 1046534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4533729 |
End bp | 4534559 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147432 |
Product | alpha/beta hydrolase fold |
Protein accession | NP_746151 |
Protein GI | 26990726 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.425727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.727928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTATG TAACCACGAA GGACGGCGTA CAGATCTTCT ACAAGGACTG GGGCCCGCGC GATGCACCGG TGATCCACTT CCACCACGGC TGGCCGCTCA GTGCCGATGA CTGGGACGCG CAGATGCTGT TCTTCCTCGC TGAAGGCTAC CGCGTGGTCG CCCACGACCG GCGGGGCCAT GGCCGCTCCA GCCAGGTATG GAACGGCCAC GACATGGACC ACTATGCCGA CGACGTAGCC GCCGTGGTCG CCCACCTGGG CACCCAGGGT GCCGTGCATG TCGGCCACTC GACCGGCGGC GGCGAGGTGG TGCGCTACAT GGCCCGGTAC CCTGAAGACA AGGTGGCCAA GGCCGTGTTG ATCGCGGCCG TCCCCCCCTT GATGGTACAA ACCCCCGGCA ACCCCGGTGG CCTGCCCAAG TCGGTATTCG ACGGTTTCCA GGCCCAGGTT GCCAGCAACC GGGCGCAGTT CTACCGGGAT GTGCCAACAG GGCCGTTCTA CGGCTACAAC CGCCCTGGGG TCGATGCCAG CGAAGGCATC ATCGGCAACT GGTGGCGCCA AGGCATGATC GGCAGTGCAA AGGCCCATTA CGATGGCATC GTGGCGTTTT CCCAGACCGA TTTCACGGAG GACCTGAAGG GCATCCAGCA GCCGGTGCTG GTGATGCACG GCGACGATGA CCAGATCGTG CCCTATGAAA ACTCCGGGGT ACTGTCAGCC AAGCTGCTGC CCAATGGCAC GCTGAAAACC TACGAAGGCT ACCCGCATGG CATGCCCACC ACCCATGCCG ATGTGATCAA TGCGGATTTG CTCGCCTTCA TCCAAAGCTG A
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Protein sequence | MSYVTTKDGV QIFYKDWGPR DAPVIHFHHG WPLSADDWDA QMLFFLAEGY RVVAHDRRGH GRSSQVWNGH DMDHYADDVA AVVAHLGTQG AVHVGHSTGG GEVVRYMARY PEDKVAKAVL IAAVPPLMVQ TPGNPGGLPK SVFDGFQAQV ASNRAQFYRD VPTGPFYGYN RPGVDASEGI IGNWWRQGMI GSAKAHYDGI VAFSQTDFTE DLKGIQQPVL VMHGDDDQIV PYENSGVLSA KLLPNGTLKT YEGYPHGMPT THADVINADL LAFIQS
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