Gene PP_4006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_4006 
Symbol 
ID1046556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4516135 
End bp4516842 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content62% 
IMG OID637147417 
Productarginyl-tRNA-protein transferase 
Protein accessionNP_746136 
Protein GI26990711 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2935] Putative arginyl-tRNA:protein arginylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00315442 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAGAGT TGGCGCGGTT GAAGTTCTAT GCCACTCAGC CCCACTCCTG CAGCTACCTG 
CCGGAGGAGC AGGCGACCAC GCTGTTCCTC GACCCCAGCC AGCCGATGGA CGTGCACGTG
TACGCCGATT TGTCGGAAAT GGGCTTTCGC CGCAGTGGCG ACCACCTGTA CCGCCCACAC
TGCCAGAACT GCAACGCCTG CGTGCCGGCG CGCATCCCGG CGGCGCGCTT CATCCCCAAC
CGCCAGCAGC GTCGCATACT CAAACGTAAC GCCGACCTGA CCGTAACCGC AGCGCGCCCG
GCGTTCAAGG AAGAGTACTT CGAGCTGTAC CGGCGCTATA TCGAAACGCG CCACGCCGAT
GGCGACATGT ACCCGCCCAG CCGCGATCAG TTTTCCACCT TCCTGGTACG CGACCTGCCG
TTCTGCTGGT TCTACGAGTT TCGCCTGGAA GGCCGGTTGA TGGCGGTGGC AGTGTGCGAC
CTGCTGCCCA ATGGCCTGTC GGCGGTGTAC ACCTTCTACG AACCGGACGA GGAGCGCCGC
AGCCTTGGCC GTTTCGCCAT TCTCTGGCAG ATCACCGAAG CGCTGCGCCA GAACCTGGAG
GCGGTTTACC TGGGCTACTG GATCAAGAAC TGCAAGAAGA TGAACTACAA GACGCAGTAC
CGACCTATCG AGCTGCTGAT AAACCAGCGC TGGGTCACCC TCAACTGA
 
Protein sequence
MTELARLKFY ATQPHSCSYL PEEQATTLFL DPSQPMDVHV YADLSEMGFR RSGDHLYRPH 
CQNCNACVPA RIPAARFIPN RQQRRILKRN ADLTVTAARP AFKEEYFELY RRYIETRHAD
GDMYPPSRDQ FSTFLVRDLP FCWFYEFRLE GRLMAVAVCD LLPNGLSAVY TFYEPDEERR
SLGRFAILWQ ITEALRQNLE AVYLGYWIKN CKKMNYKTQY RPIELLINQR WVTLN