Gene PP_3968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3968 
Symbol 
ID1046595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4476872 
End bp4477990 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content55% 
IMG OID637147378 
Productsensor histidine kinase 
Protein accessionNP_746098 
Protein GI26990673 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.838601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0786845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCTGT ACGACTTCAT TGAGAGTGAT ATGGGAAGCA TTCTCCAGGC TTGGGAGGAT 
TTCGCACGTT CGGTCAAGAC GGACTTACCC ACTCAGGATT CAGCCGGCCT CAGGAATCAC
TCTGAGAAGA TTCTGCGCAC CGTTGCCGCT GATATGCGTA CTGCTCAGAC TGCGCATCAG
CAGTCTGAGA AGGCGCAAGG CAGAGGCCCT CTAATGAGCA GCGATACGGC GGCTCAGACC
CATGCCATTA CTCGTTTGAT AGCGGGCTTT TCGATGGATC AATTGGTCTC TGAGTACCGA
GCGCTGCGCT CGAGTGTTCT ATCGCTCTGG CTGGCAAAAG AGACGCTCCG AGACGCAGAG
CATGTTCAGG ACATGATCCG CTTCAACGAG GCAATAGACC AAGCCATGGT TGAATCCATT
GCAGCCTATG GCGCAGCAGT GGAATCAACT CGAAAAATGG TACTGGCTGT GCTTGGCCAT
GATCTGCGTT CGCCATTGGG TGCGGTACTC ATGGCTGGTG ATCTAATCCT GCGACAGGAT
GAGTCAGGTG AGAAGGTAAA ACTGCTCGCC GCTCAGGTTT GTAACAGCGC TCGCCGGGCC
AACAATATGG TGAACGACCT TCTGGATCTG GCGCGCTGTA ATTTGGGAAC AGGTATCCCG
GTGCACCTGC AGCAGGTGGA GCTGAACCCG ATCTGTCGCT CGGTCATCGA GGAACTGCGC
GCGGGTTCCC CTTGGGCGAA CATTATTTTG AACGAATCCG TACAGATCAC CGGTCAGTTT
GATCCTGATC GCATGGCTCA GGTCTTCTCC AATTTGATTG GCAATGCCCT GCTCCATGGT
GACTCGACGC TACCGATCCA GGTCACTTTC TTCAGCGAAG CCGGAGTTCC GCGCTTCAGC
GTGCACAATT CCGGAGAGCC GATTCCCAGC GATGTGATGC CCTATCTGTT CAAGCCAGAG
GGCAGATATT CAAGCTACGC GGCAGAAGAA AAGGGCTCAG CCGCTGGGTT AGGGTTGGGG
CTATTCATCG CATCGGAAAT AGTCGCCAGC CATGGTGGCA GGATAGAGGT CGAGTCTGGC
GTTGAAGGGG GGACGACCTT TCAGGTCATT CTGTCCTGA
 
Protein sequence
MRLYDFIESD MGSILQAWED FARSVKTDLP TQDSAGLRNH SEKILRTVAA DMRTAQTAHQ 
QSEKAQGRGP LMSSDTAAQT HAITRLIAGF SMDQLVSEYR ALRSSVLSLW LAKETLRDAE
HVQDMIRFNE AIDQAMVESI AAYGAAVEST RKMVLAVLGH DLRSPLGAVL MAGDLILRQD
ESGEKVKLLA AQVCNSARRA NNMVNDLLDL ARCNLGTGIP VHLQQVELNP ICRSVIEELR
AGSPWANIIL NESVQITGQF DPDRMAQVFS NLIGNALLHG DSTLPIQVTF FSEAGVPRFS
VHNSGEPIPS DVMPYLFKPE GRYSSYAAEE KGSAAGLGLG LFIASEIVAS HGGRIEVESG
VEGGTTFQVI LS