Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3968 |
Symbol | |
ID | 1046595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4476872 |
End bp | 4477990 |
Gene Length | 1119 bp |
Protein Length | 372 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637147378 |
Product | sensor histidine kinase |
Protein accession | NP_746098 |
Protein GI | 26990673 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.838601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0786845 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCTGT ACGACTTCAT TGAGAGTGAT ATGGGAAGCA TTCTCCAGGC TTGGGAGGAT TTCGCACGTT CGGTCAAGAC GGACTTACCC ACTCAGGATT CAGCCGGCCT CAGGAATCAC TCTGAGAAGA TTCTGCGCAC CGTTGCCGCT GATATGCGTA CTGCTCAGAC TGCGCATCAG CAGTCTGAGA AGGCGCAAGG CAGAGGCCCT CTAATGAGCA GCGATACGGC GGCTCAGACC CATGCCATTA CTCGTTTGAT AGCGGGCTTT TCGATGGATC AATTGGTCTC TGAGTACCGA GCGCTGCGCT CGAGTGTTCT ATCGCTCTGG CTGGCAAAAG AGACGCTCCG AGACGCAGAG CATGTTCAGG ACATGATCCG CTTCAACGAG GCAATAGACC AAGCCATGGT TGAATCCATT GCAGCCTATG GCGCAGCAGT GGAATCAACT CGAAAAATGG TACTGGCTGT GCTTGGCCAT GATCTGCGTT CGCCATTGGG TGCGGTACTC ATGGCTGGTG ATCTAATCCT GCGACAGGAT GAGTCAGGTG AGAAGGTAAA ACTGCTCGCC GCTCAGGTTT GTAACAGCGC TCGCCGGGCC AACAATATGG TGAACGACCT TCTGGATCTG GCGCGCTGTA ATTTGGGAAC AGGTATCCCG GTGCACCTGC AGCAGGTGGA GCTGAACCCG ATCTGTCGCT CGGTCATCGA GGAACTGCGC GCGGGTTCCC CTTGGGCGAA CATTATTTTG AACGAATCCG TACAGATCAC CGGTCAGTTT GATCCTGATC GCATGGCTCA GGTCTTCTCC AATTTGATTG GCAATGCCCT GCTCCATGGT GACTCGACGC TACCGATCCA GGTCACTTTC TTCAGCGAAG CCGGAGTTCC GCGCTTCAGC GTGCACAATT CCGGAGAGCC GATTCCCAGC GATGTGATGC CCTATCTGTT CAAGCCAGAG GGCAGATATT CAAGCTACGC GGCAGAAGAA AAGGGCTCAG CCGCTGGGTT AGGGTTGGGG CTATTCATCG CATCGGAAAT AGTCGCCAGC CATGGTGGCA GGATAGAGGT CGAGTCTGGC GTTGAAGGGG GGACGACCTT TCAGGTCATT CTGTCCTGA
|
Protein sequence | MRLYDFIESD MGSILQAWED FARSVKTDLP TQDSAGLRNH SEKILRTVAA DMRTAQTAHQ QSEKAQGRGP LMSSDTAAQT HAITRLIAGF SMDQLVSEYR ALRSSVLSLW LAKETLRDAE HVQDMIRFNE AIDQAMVESI AAYGAAVEST RKMVLAVLGH DLRSPLGAVL MAGDLILRQD ESGEKVKLLA AQVCNSARRA NNMVNDLLDL ARCNLGTGIP VHLQQVELNP ICRSVIEELR AGSPWANIIL NESVQITGQF DPDRMAQVFS NLIGNALLHG DSTLPIQVTF FSEAGVPRFS VHNSGEPIPS DVMPYLFKPE GRYSSYAAEE KGSAAGLGLG LFIASEIVAS HGGRIEVESG VEGGTTFQVI LS
|
| |