| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3940 |
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| Symbol | |
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| ID | 1046625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4442667 |
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| End bp | 4443980 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637147350 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_746070 |
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| Protein GI | 26990645 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.100608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0208763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATTG CGAATGCAAC CACGGTCCAC AGTGACATCG ACCATGGCAC GAAAGCGCTG
TACAGCAAGA TCACCTGGAG GCTCATCCCC TTCTTGTGTT TCTGCTACCT CGCAGCTTAT
CTGGACCGCA TCAATGTCGG CTTCGCCAAG CTGCAGATGC TCGAAGACCT GCAGTTCAGC
ACAGCGGCCT ATGGCCTGGG TGCAGGGCTG TTCTTCGTCG GCTACATCAT CTTCGAAGTG
CCGAGCAACC TGATCCTGCA GCGCGTTGGC GCCAAGCTGT GGATCGCCCG CATCATGATC
ACCTGGGGCC TGCTGTCGGC CTGCACCATG TTCGTCACCA GCACCACCCA GTTCTATATC
CTGCGTTTCC TGCTGGGGGC GGCCGAGGCC GGCTTCCTGC CAGGCGTGCT GTACTACCTG
ACCATGTGGT ACCCCACCTA TCGCCGCGGG CGCATCATTG CCCTGTTCAT GATCGGGCTG
CCGTTGTCGA GCGTGATTGG CGGGCCGATT TCTGGCTGGA TCATGGGGCA TTTCGACCAG
GTTCAAGGTT TGCATGGGTG GCAGTGGCTG TTCCTGCTGG AGGCGATCCC CAGCGTTTTG
CTCGGCATCC TCACGTTCTG GGCATTGCCT AACCATTTCC AGCAGGCCAA GTGGCTGTCG
GCTGACGACA AGGCACAACT GGCGGCAGAC CTGGCCGCCG ACGATGCCGA GGGCAAGGAC
AGCAAACACA GCTTCCGCGA TGGCTTCTTC AACCTTAAGG TGTGGATGCT CGGTGGTATC
GACTTTTCGA TCCTGCTCAG CGCCTATGCG ATGGGCTTCT GGATGCCGAC CTTCATCCGC
GATGCGGGCG TCAGCGACAC CTTCCATATC GGCCTGCTCA CGGCCATTCC AAGCCTGGCC
GCGCTGGCCG GCATGCTCAT GATCGGGGCC AGCTCCGACC GCCACCGCGA GCGCCGCTGG
CACATCATCG TGCCGTTTAT CATTGGTGCA ATCGCCATGG CCAGCAGCAC CTTGTTCAGC
CAGAACCTGG TGATGACCGT GGTGCTGTTC GCCATTGCCT CGGCGGCGAT CATCGGCGCG
GTGCCGGTGT TCTTCAGCCT GCCGGCGACT TTCCTCAAAG GCACCGCAGC CGCCACCGGC
TTTGCCCTGG CCTGTTCGGT AGCCAACATC GCCGGCCTGG TGAGCAACTC ACTGATGGGC
GTGGTCACCG ACCTCACCGG CACCTCGCAC GCTGCGCTGT GGGTGTTTGC CGGCTGCCTG
ATCCTCAGCT GCTTCCTGGT CATCGCCTTG CCGGCCAAGC TGGTCAACCG CTAG
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| Protein sequence | MPIANATTVH SDIDHGTKAL YSKITWRLIP FLCFCYLAAY LDRINVGFAK LQMLEDLQFS
TAAYGLGAGL FFVGYIIFEV PSNLILQRVG AKLWIARIMI TWGLLSACTM FVTSTTQFYI
LRFLLGAAEA GFLPGVLYYL TMWYPTYRRG RIIALFMIGL PLSSVIGGPI SGWIMGHFDQ
VQGLHGWQWL FLLEAIPSVL LGILTFWALP NHFQQAKWLS ADDKAQLAAD LAADDAEGKD
SKHSFRDGFF NLKVWMLGGI DFSILLSAYA MGFWMPTFIR DAGVSDTFHI GLLTAIPSLA
ALAGMLMIGA SSDRHRERRW HIIVPFIIGA IAMASSTLFS QNLVMTVVLF AIASAAIIGA
VPVFFSLPAT FLKGTAAATG FALACSVANI AGLVSNSLMG VVTDLTGTSH AALWVFAGCL
ILSCFLVIAL PAKLVNR
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