| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3859 |
|---|
| Symbol | |
|---|
| ID | 1046706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4383855 |
|---|
| End bp | 4384499 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637147268 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_745989 |
|---|
| Protein GI | 26990564 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3778] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATGA CCGAGGACGA TTACCGCGAC CAGCTGCAGC AGCTGTTCCC TCCGGGCCCA
GCGTTTGATG CCGAGCTACA GCCGGATGTT GCCCAGCTGA TTGATGGCTC GGCCCCGGAG
CTGGCCCGGG TCAACGCGGC AGGCGCACAG CTGTCACTTG AGCAGAACCC GGCCACGGTG
ACTTGGCTGC TGCCGGATTG GGAGGCATAT CTCGGCTTGC CGGATGCCTG CACGGTGCCC
GGCTCGCAGA CGCTGGAAGA ACGCCGGCAG GCGGTCATCA ACAAGCTGAC CGCGACGGGT
GCCCCGCAGC GTTCGTACTA CCTGAGCCTG GCGGATCAGG CCGGAGTCGA GGCGCAGATT
GCCGAGTTTC GCCCGCCGCG CGTGGGGCCA GCCATGACTG GCGACTTCCT CTACGGCGAT
GGCTGGCCGT GGTCGTGGCA GGTCCAAGTG CCTATCGACC ACTTTGGCAC GGTAGAGGCT
GCCGCGCTGG ACTGCCGCCT GCAGCTGGAG GCGCCTGAGT ACACCGATGT GCGCATGGGC
TTTGGCTTGG AGGTGGTGCA GGGGATTGCC GAGAAGGTCG ACCAGCTGTT CAACGCCATT
CATTACGTCG CTCCCGCAGC GGTGAGCGGC TATAAGGACC TTTGA
|
|---|
| Protein sequence | MAMTEDDYRD QLQQLFPPGP AFDAELQPDV AQLIDGSAPE LARVNAAGAQ LSLEQNPATV
TWLLPDWEAY LGLPDACTVP GSQTLEERRQ AVINKLTATG APQRSYYLSL ADQAGVEAQI
AEFRPPRVGP AMTGDFLYGD GWPWSWQVQV PIDHFGTVEA AALDCRLQLE APEYTDVRMG
FGLEVVQGIA EKVDQLFNAI HYVAPAAVSG YKDL
|
|---|
| |