| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3849 |
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| Symbol | |
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| ID | 1046716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 4372649 |
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| End bp | 4374955 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637147258 |
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| Product | calcium-binding protein, hemolysin-type |
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| Protein accession | NP_745979 |
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| Protein GI | 26990554 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.184239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.669368 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGTTA CGCCGAGAAG ACGAACATCC ATTGTAAATG GCGGGGTTAA TGACTCTTGG
ACAGATGGCT CATCCTCTCA AACTTGGTAT ATCGCAGACA CAAATCCAAA TGGAACCTAT
AACGTTATTA GTGTCAAAAT AGAGGACGTC CAAGGAAATT CCAGAATTTA CTCCATAAGT
GAACTAAAAG AACTAGGGAT AAACACCAGC ATCAACCTAG TCAATTCAAC AGTCGACACT
ACACCCCCAT TTTTGAACTC CTTGACGATA CCTAAAGAAA TTGATCTATC CTTGGGAAAG
GCGGGCTTCA CAATATCCAG CCTCGCTACG GATGACATGT CTGGCATCAA AAATATTGTC
GTATCATTTG ACAAAAAATT TGCATACAGC TACTCACTAG ATGATAGCTA CGCAGAACAT
GCCAACATTC TTGTCAATGG CGGCGTAACC GATTCTTGGT CAGACGGCTC GTCTTCTCAA
ACCTGGTTTA TAGCTGACAC CAACCCCGCT GGAACTTATA ATATTACCAG CATCAACATC
CAAGACCTCC AAGGCAATAT TCGGTCGTAC TCTCCAGCAG AGCTTGAAAA GCTCGGCATC
AATACGAGTG TAGATTTCGT AAACTCGACA CCGGACACCT CTCCTCCAAG TTTAAAATTC
CTGAAAATCC CAACTGTTGT AGACCTTTCG TCAGGAAAAG CAGAACTGAC AATAGATGGG
ATCGCAACCG ACGACTTAGC AGGAATCAAA AATATTATCG TGACATTTAA TAAGAATTTA
GCGTACTCAT ACTCATCAAC TGACACCTAC GCCGAAAACA CCAGTATTCT CGTCAACGGT
GGAGTTTATG ACTCTTGGAA AGACGGCTCA TCTTCTCAAA CCTGGTACGT TGCCGGGACC
AATCCCTCGG GATTATATAA TGTTACTAGC GTGTTAATTC AAGACCTTCA AGGCAACACT
CGATCCTATG CGCCAAGCGA GCTGGCCGCC CTAGGAATAA ACACCACGAT CCTTATGGTG
GCCACGAAAA GCGTGTTGAC ATCTGCAGGG GATTCATTCT CTGGAAGCTC TCGTGCCGAC
TGGATAGTCG GGGGAGACGG CAATGATGAG CTGAAGGGTT TGAGTGGCGA CGATATGCTA
GAAGGCGGTG ATGGAGATGA CATTCTGGAT GGCGGGACAG GCGCCGATAT CATGATCGGC
GGGCAGGGAA ATGACACCTA TTATGTCGAC TGGGGTAATG ACAAAGTGAT CGAAACCTCC
AGTGCTGGTG GGATTGACAC AGTCATTTCG AGCGTCTCCA GAACCTTGGG TGCTTACCAG
GAAAATCTAG TCCTAACTGG TAGTAGCGCA ATTAATGGCA CTGGCAACAA CCTCGCTAAC
ACGCTCACAG GTAACGATGC TGATAACGTC CTCAACGGCG GAGCGGGCGC GGACATCATG
GTTGGCGGCT TAGGGAATGA CACTTATTAC GTCGACTGGG GTAATGACAA AGTCATCGAA
ACCTCCGCCA ATGGTGGCAT CGACACGATC ATCTCAAGTG TCAGCCGTAC TTTAGGCGAT
TATCAAGAAA ACCTCGTTCT GACTGGAACT GCGGCGCTGT ACGGCAATGG CAACAATTTA
GCTAACACGC TTACGGGTAA CAACGGTGAC AATGTGCTGA ACGGCGGTGC CGGTGCTGAC
ACGATGATCG GCGGCCTAGG AAATGACACC TACTACGTTG ACTGGGGTAA TGACAAAGTC
ATCGAGACCT CAGCGAATGG CGGCATCGAC ACCGTTATCT CCAGTGTCAG CCGCACTTTG
GGTGACCATC AAGAAAACCT GGTATTAACT GGCACCAAAG CTAACTACGG CACAGGAAAC
AGTCTTGATA ATACCTTGAC CGGCAATGGT GCAGATAACC TTCTCAATGG TGGAGCGGGA
AACGACACTC TGGTAGGCGG GGCTGGAAAC GATCGCCTAG TTGGCGACCT AGGAAAAGAT
GTCCTCACAG GCGGAGCTGG AAATGATGTA TTCGCTTTCA ACACCACCAA AGAGAGTGGA
CTTACCAGTA CAGCCTGGGA TGTCATTACC GACTTCAAGC GGGGGTCAGA TAAAATCGAT
GTATCCGGCA TAGATGCCAA TACAACTACA AATACTAACG AAGCATTCAA CGTTGTGCTG
AGCGGCGCTA AAACTTTTAC AGCTGCCGGC CAGTTAAACT TCGTAGATGG GGTTCTTTAC
GGAAATACAG ACTCTGATAT CGAACCGGAG TTCGCAATCC AGATCGTTGG AGTTACATAT
TTGGCCTCAT CAGATTTGAT TCTCTAG
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| Protein sequence | MTVTPRRRTS IVNGGVNDSW TDGSSSQTWY IADTNPNGTY NVISVKIEDV QGNSRIYSIS
ELKELGINTS INLVNSTVDT TPPFLNSLTI PKEIDLSLGK AGFTISSLAT DDMSGIKNIV
VSFDKKFAYS YSLDDSYAEH ANILVNGGVT DSWSDGSSSQ TWFIADTNPA GTYNITSINI
QDLQGNIRSY SPAELEKLGI NTSVDFVNST PDTSPPSLKF LKIPTVVDLS SGKAELTIDG
IATDDLAGIK NIIVTFNKNL AYSYSSTDTY AENTSILVNG GVYDSWKDGS SSQTWYVAGT
NPSGLYNVTS VLIQDLQGNT RSYAPSELAA LGINTTILMV ATKSVLTSAG DSFSGSSRAD
WIVGGDGNDE LKGLSGDDML EGGDGDDILD GGTGADIMIG GQGNDTYYVD WGNDKVIETS
SAGGIDTVIS SVSRTLGAYQ ENLVLTGSSA INGTGNNLAN TLTGNDADNV LNGGAGADIM
VGGLGNDTYY VDWGNDKVIE TSANGGIDTI ISSVSRTLGD YQENLVLTGT AALYGNGNNL
ANTLTGNNGD NVLNGGAGAD TMIGGLGNDT YYVDWGNDKV IETSANGGID TVISSVSRTL
GDHQENLVLT GTKANYGTGN SLDNTLTGNG ADNLLNGGAG NDTLVGGAGN DRLVGDLGKD
VLTGGAGNDV FAFNTTKESG LTSTAWDVIT DFKRGSDKID VSGIDANTTT NTNEAFNVVL
SGAKTFTAAG QLNFVDGVLY GNTDSDIEPE FAIQIVGVTY LASSDLIL
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