Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3835 |
Symbol | |
ID | 1046730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4359959 |
End bp | 4361119 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637147243 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | NP_745965 |
Protein GI | 26990540 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTTCAG CTGACTGCCT CGACGCTTCC GTCATGCCCG CCCATCGTTA CGAACAGCTG GTTCAGTCGG TGGTGGATTA TGCCATCTAC ATGCTCGACC CTTCTGGCCA TGTGGTGTCG TGGAATGCCG GCGCGCAACG GATCAAGGGT TACCGTAGAG ATGAAGTGAT CGGCAAGCAC TTTTCGTTGT TTTTCACGCC GCAGGATTGT GCGGATGGCC GCCCTGAGCG TCTGCTGTGC CAGGCGCTGG AGCAAGGTGT GGCGCAGGAC GAAGGCTGGC GGGTGCGCAA GGACGGCACG CAGTTCTGGG CCTTGGCGGC ACTGGATGTG ATCCGTGATG AAAGTGGCCA GATCATTGGC CTGGCCAAGG TGACACGTGA TATCACTGAC CGTCGCGAGA CGGCGCAGCA GCTCGACGCA GTGCGCGCCC AGCTGTTCCA GGCGCAGAAG CTTGAAGCCC TCGGCCAGTT GACCGGTGGT CTGGCGCACG ACTTCAACAA CATGTTGACC ATTATCATCA GCTCGGCGCG CCTGGCGCTG GCCACCCAGG ACCCGGCACG CACCCAGCGC ATGTTGCAGC ACATCCTCGA TGCCAGCCAG CGTGGCACCG AACTGACCCA GCAATTGCTC AGTTTTGCCC GTCACCGCAA GTTCGATGTG GCCAGCGTTG CCCCGGCAGA GCTGGTTAAC GCTACGCGTG GCCTGCTTGA ACATGCATTG CCAAGCTCGA TTGACTTGAA GGTGTTGCTG CAACCGGACC TGCCGTTGAT CGAGGTGGAT GCCGGGCAAC TGCAGATGGT GTTGCTCAAC CTGTTGTTCA ATGCCCGTGA TGCCATCGAC GGGCATGGCC GCATCAGCCT GACTGTCGAT GTGGTCGAGT TGTTCGGCGA AGTTGAAGGG CTGAAGGGCA GCTTCGTGCG CTTCGAGGTG GAAGACAGCG GCGAAGGCAT ACCCACAGAG ATACTGCCGC GCATCTTCGA GCCGTTTTTC ACCACCAAGC CTTTCGGCAA GGGTACCGGC CTGGGGCTCA GCCAGGTCTA TGGGTTCGCC CGGCAAAGTG GCGGTGCCAT TTGTGTCGAC AGCGAGCCTG GCCGGGGAAC TTGCATGCGA CTGTACTTGC CAATGTATCA GAACCAGACG GATAGCCCAC TCGACAGGTA G
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Protein sequence | MVSADCLDAS VMPAHRYEQL VQSVVDYAIY MLDPSGHVVS WNAGAQRIKG YRRDEVIGKH FSLFFTPQDC ADGRPERLLC QALEQGVAQD EGWRVRKDGT QFWALAALDV IRDESGQIIG LAKVTRDITD RRETAQQLDA VRAQLFQAQK LEALGQLTGG LAHDFNNMLT IIISSARLAL ATQDPARTQR MLQHILDASQ RGTELTQQLL SFARHRKFDV ASVAPAELVN ATRGLLEHAL PSSIDLKVLL QPDLPLIEVD AGQLQMVLLN LLFNARDAID GHGRISLTVD VVELFGEVEG LKGSFVRFEV EDSGEGIPTE ILPRIFEPFF TTKPFGKGTG LGLSQVYGFA RQSGGAICVD SEPGRGTCMR LYLPMYQNQT DSPLDR
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