| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3812 |
|---|
| Symbol | |
|---|
| ID | 1046753 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 4337359 |
|---|
| End bp | 4338378 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637147220 |
|---|
| Product | Alpha/beta hydrolase fold-3 domain protein |
|---|
| Protein accession | NP_745942 |
|---|
| Protein GI | 26990517 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.422077 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.430196 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTG TCCACAAAGC CCTCACCACC TCCCTCTTGG CCCTGTCCGT TTCCAGTGCC
TTCGCCGCAG GCAGCCCTGG TGTCGAACAA CACACCCAGG CCTTCCTCGA AGCCCTGGAG
AAAGGGGGTG GCAAGCCGCT GGAACAGCTC ACACCAAACG ACGCCCGCGC GGTACTGACC
GGTGCCCAGG CTTCGGTAAA GGTCGACCTA TCGGGGGTCG AGGTGAAGGA ACGCACGATT
CAGGCCAATG GCCAGTCGAT CAAGCTGCAA GTGGTGCGCC CGACTAATGT CAAAGGTGAT
CTGCCGGTGT TCATGTTCTT CCACGGCGGC GGTTGGGTGC TGGGCGACTT CCCGACCCAC
CAGCGACTGA TCCGCGACCT GGTGGTCGGC TCGGGTGCGG TGGCGGTCTA TGTGGACTAC
ACCCCCTCAC CGGAAGCGCA CTACCCGACG GCGATCAACC AGGCCTACGC CGCGACGCGC
TGGGTGGCCG AGCATGGCAA GGAGATCGGC GTGGATGGCA AGCGCCTGGC GGTAGCCGGC
AACAGCGTTG GCGGCAACAT GGCGGCGGTG GTTGCACTCA AGGCCAAAGA GGCCGGCACC
CCTGCCCTGC GCTTCCAGTT GCTGCTGTGG CCGGTGACCG ACGCCAGCTT CGAGACAGCG
TCGTACAAGC AGTTTGCCGA AGGACACTTC CTGACCACCG GGATGATGAA GTGGTTCTGG
AACAACTACA CCGTTGATGC AAAGGCGCGG GCGCAGATCT ACGCCTCGCC GCTGCGGGCG
TCCGCCGAAC AGCTGAAGGG CTTGCCACCG GCCCTGGTGC AAACGGCTGA GTTCGATGTG
CTTCGGGATG AAGGTGAGGC GTATGCCCGC AAGTTGAATG CGGCGGGCGT GACAGTAACC
TCGGTGCGCT ACAACGGAAT GATTCATGAC TATGGGCTGC TCAACCCGTT GAGCCAAGTG
CCGGCAGTAA AGGCGGCGCT GCGGCAGGCG GGCAACGAAC TTAAAGTGCA TCTGCAGTGA
|
|---|
| Protein sequence | MNIVHKALTT SLLALSVSSA FAAGSPGVEQ HTQAFLEALE KGGGKPLEQL TPNDARAVLT
GAQASVKVDL SGVEVKERTI QANGQSIKLQ VVRPTNVKGD LPVFMFFHGG GWVLGDFPTH
QRLIRDLVVG SGAVAVYVDY TPSPEAHYPT AINQAYAATR WVAEHGKEIG VDGKRLAVAG
NSVGGNMAAV VALKAKEAGT PALRFQLLLW PVTDASFETA SYKQFAEGHF LTTGMMKWFW
NNYTVDAKAR AQIYASPLRA SAEQLKGLPP ALVQTAEFDV LRDEGEAYAR KLNAAGVTVT
SVRYNGMIHD YGLLNPLSQV PAVKAALRQA GNELKVHLQ
|
|---|
| |