Gene PP_3744 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3744 
SymbolglcC 
ID1046289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4273083 
End bp4273874 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637147153 
ProductDNA-binding transcriptional regulator GlcC 
Protein accessionNP_745875 
Protein GI26990450 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCTAC CAGCAGGAGT GTGCGCAGTG GGTACTGAAG GCAAGGCCAA GGTCGCCGAC 
CAGGTGGCCG AACGGGTTGA GCGGCTTATC GTCGAAGGCG TGCTCAAGGT GGGCCAGGCA
CTGCCGTCGG AGCGGCGGCT GGTGGAAAAG CTTGGCTGTT CACGTTCGGC CTTGCGCGAG
GGCCTGCGCG TTCTGCGTGG GCGCGGCATC ATCGACACCG AACAGGGGCG GGGTTCGTTC
GTCGCCGATC TCACCGGGCA GGCGGGTGCT ACGCCTTTGA TGCACCTGTT CAGTTCGCAA
CCGCGCACTC TGTTCGACCT GCTGGAGGTC CGGGCGTTGC TGGAGGCTGA GTCGGCGCGG
CTGGCGGCGT TGCGGGCTAC CGACGTCGAC CGCCTGCTAA TCCGCCGGCG CTACGAAGAA
ATGCTGGCTG CGCACGAGGC TGCGCAGGCG CTCGATGCCC GTGAGCATGC CCGCCGTGAC
CATGCCTTTC ACCGGGCCAT CAGTGAGGCG TCGCATAACC CAGTGCTGGT GCATACCCTG
CAATCGCTCA GTGACCTGAC GTTGAGCACG GTGTTTGCGT CGGTCAACAA CTTGTACTGC
CGGCCAGCGC AGAAACGCCA GATTGATCGG CAGCATGCGC GGTTGTACCG CGCAGTCATG
GAACAACTGC CCGAGCAGGC GCAGCGGGCG GCGCGTGAGC ATATCAACGG CATACGCGAC
AGTTTGCGGG AGATCGAGCA GGAAGAGCAG CGCCTGGTCA GGGCGACCAT GCGTATGGAT
GGCTGGGGGT GA
 
Protein sequence
MVLPAGVCAV GTEGKAKVAD QVAERVERLI VEGVLKVGQA LPSERRLVEK LGCSRSALRE 
GLRVLRGRGI IDTEQGRGSF VADLTGQAGA TPLMHLFSSQ PRTLFDLLEV RALLEAESAR
LAALRATDVD RLLIRRRYEE MLAAHEAAQA LDAREHARRD HAFHRAISEA SHNPVLVHTL
QSLSDLTLST VFASVNNLYC RPAQKRQIDR QHARLYRAVM EQLPEQAQRA AREHINGIRD
SLREIEQEEQ RLVRATMRMD GWG