Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3720 |
Symbol | |
ID | 1046486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4243026 |
End bp | 4243733 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147131 |
Product | ribosyldihydronicotinamide dehydrogenase (quinone) |
Protein accession | NP_745853 |
Protein GI | 26990428 |
COG category | [R] General function prediction only |
COG ID | [COG2249] Putative NADPH-quinone reductase (modulator of drug activity B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.405823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.727928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGTGA ATGTACTGAT CGTCCACGCT CACCCCGAAC CGCAATCGTT CACGGCAGCC CTGCGTGACC AGGCTGTGGA AACCTTCCGT GCCCAAGGTC ATCAGGTGCA GGTCAGTGAC TTGTACGCCA TGGGCTGGAA CCCGGTGGCC AGTGCCGATG ACTTTACCCA GCGCGAGAAC CCCGAGTACC TCGTGTATGC GCTGGAGCAG CGTCAGGGCG TCAAGCGCGG TGCCATTGCC GCAGATATCC AGCAGGAGCT GGACAAGCTG TTGTGGGCCG ATCTGCTGGT GCTGAACTTC CCGATCTTCT GGTTCTCGGC CCCGGCCATG CTCAAGGGCT GGATCGACCG GGTGCTGGTG TCGGGGGTGT GCTATGGCGG CAAGCGCTTC TACGACCAGG GCGGGTTGGC CGGCAAGAGG GCGCTGGTGA CCGTGACCCT GGGCGGGCGC GAGCACATGT TTGGCGACGG CGCGATTCAC GGGCCGCTGG AAGACATGCT GCGGCCGATT CTGCGGGGCA CGCTGGCCTA TGTCGGGTTC GAGGTGCTGC CGCCGTTCGT GGCGTGGCAT GTGCCGTACA TCAGTGCTGA TGCGCGGCAG GACTTTCTGC AGCAATACCG GCAGCGTCTG GAGCAGCTCT CGGACGACCA GCCACTGGTG TTCCCGCGCC TGGCGCAGTT CGATGAAGCG TTGTACCCGC TGACGTGA
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Protein sequence | MLVNVLIVHA HPEPQSFTAA LRDQAVETFR AQGHQVQVSD LYAMGWNPVA SADDFTQREN PEYLVYALEQ RQGVKRGAIA ADIQQELDKL LWADLLVLNF PIFWFSAPAM LKGWIDRVLV SGVCYGGKRF YDQGGLAGKR ALVTVTLGGR EHMFGDGAIH GPLEDMLRPI LRGTLAYVGF EVLPPFVAWH VPYISADARQ DFLQQYRQRL EQLSDDQPLV FPRLAQFDEA LYPLT
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