Gene PP_3696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3696 
Symbol 
ID1045116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4213727 
End bp4214947 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content54% 
IMG OID637147107 
Producthypothetical protein 
Protein accessionNP_745829 
Protein GI26990404 
COG category[S] Function unknown 
COG ID[COG4913] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000237881 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCTCGAT GGAACATCCT TGATGACGCT CATGGCAGGG CAAGCATCGA GCATGCGATG 
TTGCTCAGGG ATCATGAGGC AGCGAAGGCA ATGGTTGTAA AAACGTCCAG CCGAGCGGAA
GTCGGAATGA CAGCCGAGGC CCGCGCTGCA GCCGGCAAGC ACCTTCCTGC CGTTAATGCT
GATCAGTTGC AGGATCTCAA TGATATCGAG AGGCAAGGTT ACGAAAAGCT TGGTAAACGG
ATTAGCACTG CAACCGATCT GCTGGTTGAG CTTCAGAATG ACTTGATTAG AAAAATGTCC
GATGCCAAGA GCCGGGACAC TGGAGCGTTA TCAGAGGTTG GTCGTGAGCT GGTTGATGTG
CCTGCCTATA TTGAGCGTCT GCGTGTCCTG ACCGAGGAGG CGCTGCCGGA AAAGGTGGAG
AGGTTCCTCA ACTACCTCAA CCGATCCTCT GACGACGGTG TCACTCAGCT GTTGAGCTAC
ATCGATCAAG AGGTAACGCA GATCCAGGAG CGAATTGACG ACCTGAACAC CACGTTGCGG
CGGGTCGAAT TCCAGTCAGG GAAGTATCTG CGCTTGGTAA CTGGCAAGGT CGTGCATGAC
AGCCTGCGTG CTCTGCAGGC TGCTCAGCGC AAGCTTACAT CGGCTCGCTT CTCAGACGAC
GTTGGCGAAA CCCATTACCG AGCCCTGAAG AGCCTTGTTG AGATCCTCAA GGATGCGTGT
ACGAAAAGTC GGAATATCTC CTCGAGAGCG ATGCTAGATC CAAGGTTTCG GTTGGCATTT
TCTGTATCCG TTGTGGATTC GATTACTGGC GTGGCAACAG AGGGGCGAAA AGGCTCTCAG
GGTGACAGCG GTGGCGAGAA AGAAATCGTA GCGTCTTACG TCCTTACAGC ATCGTTGGGC
TATGCACTTT GCCCGGTAGG CGAAAGCAAG CCGTTGTTCG GCACTATCGT GTTGGACGAA
GCCTTTTCTA AAAGCTCGCC AAGCGTCGCC GCGCGGATCA TCGCAGCCCT CAAGGAGTTC
GGACTTCACG CGATCTTCAT TACGCCAAAC AAAGAGCTGC GCTTGCTGCG GCTTCACACA
CGCTCTGCAA TCGTCGTTCA CAAGAAGGAA GGCCAATCGA CGCTTGTATC AATGAGCTGG
GAGGCGCTTG AAAAGTATCA TCGAGGGCGG AAGGAGGACG GCGAAGGGAC TGGCGCCGAA
GGCACGAGTA ATCCTCAGTG A
 
Protein sequence
MARWNILDDA HGRASIEHAM LLRDHEAAKA MVVKTSSRAE VGMTAEARAA AGKHLPAVNA 
DQLQDLNDIE RQGYEKLGKR ISTATDLLVE LQNDLIRKMS DAKSRDTGAL SEVGRELVDV
PAYIERLRVL TEEALPEKVE RFLNYLNRSS DDGVTQLLSY IDQEVTQIQE RIDDLNTTLR
RVEFQSGKYL RLVTGKVVHD SLRALQAAQR KLTSARFSDD VGETHYRALK SLVEILKDAC
TKSRNISSRA MLDPRFRLAF SVSVVDSITG VATEGRKGSQ GDSGGEKEIV ASYVLTASLG
YALCPVGESK PLFGTIVLDE AFSKSSPSVA ARIIAALKEF GLHAIFITPN KELRLLRLHT
RSAIVVHKKE GQSTLVSMSW EALEKYHRGR KEDGEGTGAE GTSNPQ