Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3696 |
Symbol | |
ID | 1045116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4213727 |
End bp | 4214947 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637147107 |
Product | hypothetical protein |
Protein accession | NP_745829 |
Protein GI | 26990404 |
COG category | [S] Function unknown |
COG ID | [COG4913] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000237881 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGCTCGAT GGAACATCCT TGATGACGCT CATGGCAGGG CAAGCATCGA GCATGCGATG TTGCTCAGGG ATCATGAGGC AGCGAAGGCA ATGGTTGTAA AAACGTCCAG CCGAGCGGAA GTCGGAATGA CAGCCGAGGC CCGCGCTGCA GCCGGCAAGC ACCTTCCTGC CGTTAATGCT GATCAGTTGC AGGATCTCAA TGATATCGAG AGGCAAGGTT ACGAAAAGCT TGGTAAACGG ATTAGCACTG CAACCGATCT GCTGGTTGAG CTTCAGAATG ACTTGATTAG AAAAATGTCC GATGCCAAGA GCCGGGACAC TGGAGCGTTA TCAGAGGTTG GTCGTGAGCT GGTTGATGTG CCTGCCTATA TTGAGCGTCT GCGTGTCCTG ACCGAGGAGG CGCTGCCGGA AAAGGTGGAG AGGTTCCTCA ACTACCTCAA CCGATCCTCT GACGACGGTG TCACTCAGCT GTTGAGCTAC ATCGATCAAG AGGTAACGCA GATCCAGGAG CGAATTGACG ACCTGAACAC CACGTTGCGG CGGGTCGAAT TCCAGTCAGG GAAGTATCTG CGCTTGGTAA CTGGCAAGGT CGTGCATGAC AGCCTGCGTG CTCTGCAGGC TGCTCAGCGC AAGCTTACAT CGGCTCGCTT CTCAGACGAC GTTGGCGAAA CCCATTACCG AGCCCTGAAG AGCCTTGTTG AGATCCTCAA GGATGCGTGT ACGAAAAGTC GGAATATCTC CTCGAGAGCG ATGCTAGATC CAAGGTTTCG GTTGGCATTT TCTGTATCCG TTGTGGATTC GATTACTGGC GTGGCAACAG AGGGGCGAAA AGGCTCTCAG GGTGACAGCG GTGGCGAGAA AGAAATCGTA GCGTCTTACG TCCTTACAGC ATCGTTGGGC TATGCACTTT GCCCGGTAGG CGAAAGCAAG CCGTTGTTCG GCACTATCGT GTTGGACGAA GCCTTTTCTA AAAGCTCGCC AAGCGTCGCC GCGCGGATCA TCGCAGCCCT CAAGGAGTTC GGACTTCACG CGATCTTCAT TACGCCAAAC AAAGAGCTGC GCTTGCTGCG GCTTCACACA CGCTCTGCAA TCGTCGTTCA CAAGAAGGAA GGCCAATCGA CGCTTGTATC AATGAGCTGG GAGGCGCTTG AAAAGTATCA TCGAGGGCGG AAGGAGGACG GCGAAGGGAC TGGCGCCGAA GGCACGAGTA ATCCTCAGTG A
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Protein sequence | MARWNILDDA HGRASIEHAM LLRDHEAAKA MVVKTSSRAE VGMTAEARAA AGKHLPAVNA DQLQDLNDIE RQGYEKLGKR ISTATDLLVE LQNDLIRKMS DAKSRDTGAL SEVGRELVDV PAYIERLRVL TEEALPEKVE RFLNYLNRSS DDGVTQLLSY IDQEVTQIQE RIDDLNTTLR RVEFQSGKYL RLVTGKVVHD SLRALQAAQR KLTSARFSDD VGETHYRALK SLVEILKDAC TKSRNISSRA MLDPRFRLAF SVSVVDSITG VATEGRKGSQ GDSGGEKEIV ASYVLTASLG YALCPVGESK PLFGTIVLDE AFSKSSPSVA ARIIAALKEF GLHAIFITPN KELRLLRLHT RSAIVVHKKE GQSTLVSMSW EALEKYHRGR KEDGEGTGAE GTSNPQ
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