Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3654 |
Symbol | |
ID | 1043427 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4149545 |
End bp | 4149997 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637147068 |
Product | AsnC family transcriptional regulator |
Protein accession | NP_745790 |
Protein GI | 26990365 |
COG category | [K] Transcription |
COG ID | [COG1522] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.652565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0825689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATAGAA CTGATCGAAA AATCCTTGCC GAGCTGCAAA AAGACGGGCG CCTGTCGGTA ACCGAACTGG CCGACCGCGT AGGGCTCAGC CTGTCACCCT GCCATCGGCG CTTGAAGGCA CTGGAAGAGT CCGGAGCCAT TCTGGGCTAT CACGCACGGC TGGCACCGAG CGCCCTTGGG CTGAACTTTG CCGCGCTGGT ATTCGTGACG CTACGCGAGG TAACCCGCCA GCCGGTGGCG GACTTTGAAA CGGCACTGGC GCAGATCCCG CAGATTGTCG AAGCGCAGCG GCTGTTCGGC GACCCGGATT ACCTGCTGCA TGTGGTAGCC AAGGACCTGC CGGCGTTTCA GAAGCTGTAT GACGAGCACC TGACCAGTAT TCCCAATGTG AAACGCTTGA GCTCGACCTT GGTGATGAAG GAAGTGATCC AGGATCGGTT GCTCCCCATG TAG
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Protein sequence | MDRTDRKILA ELQKDGRLSV TELADRVGLS LSPCHRRLKA LEESGAILGY HARLAPSALG LNFAALVFVT LREVTRQPVA DFETALAQIP QIVEAQRLFG DPDYLLHVVA KDLPAFQKLY DEHLTSIPNV KRLSSTLVMK EVIQDRLLPM
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