Gene PP_3635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3635 
Symbol 
ID1046495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4131196 
End bp4131951 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID637147049 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionNP_745771 
Protein GI26990346 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.606268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.873181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCC ATGTCGTACA TGCCGGCCTT GGGCTGGTCG GGTTGCTGGC CTTGTTGCTG 
TTATGGTGGG CCGGTGTAGC ACTGTTCGGC CAGGCCGACG GCCTGTCGGC GCGCTTTTCG
CCGGCGGCAA CCCTGGCCAG CCTGGTCGAG CTGCTGGGGC AGGGCGAGGT CTATGGGCAT
ATCTGGGTCA GCCTCAAGCG CATCCTGATT GGGCTGCTGC TGGCGCTGCT GATGGGCGTG
CCGTTGGGCT TGCTGGTAGG CAGCTACCGG CACCTGGAGG CGGTGACCAC GCCGGCATTT
CAGTTTCTGC GCATGATATC GCCATTGTCG TGGATGCCTG TGGTGGTGAT GCTGATGGGC
GTGGGTGACC AGCCGATCTA CTTCCTGCTG GCGTTTGCCG CGTTGTGGCC GATCTTGCTG
AATACGGCGG CAGGGGTGCG TCAACTGGAC CCGCGCTGGC TGCAACTTAG CCGCAGCTTG
AGTGCAACGC GCTGGGAAAC CTTGTGCAAG GTGATCGTGC CGGGGGTAAT CGGTCACGTG
CTGACGGGCG TGCGCCTGGC CATCGGTATT CTGTGGATTG TGCTGGTGCC GTGCGAAATG
CTTGGGGTGA GTGCGGGGCT TGGGTATTTC ATTCTTGATA CCCGTGACCG GCTGGCGTAT
TCCGAACTGA TGGCGATGGT GCTGCTGATT GGCGTGCTGG GGTTTGTGCT GGATGCTCTG
GCGCGTGGGC TGCATCGGCG CTGGGTGCAT GGCTGA
 
Protein sequence
MRTHVVHAGL GLVGLLALLL LWWAGVALFG QADGLSARFS PAATLASLVE LLGQGEVYGH 
IWVSLKRILI GLLLALLMGV PLGLLVGSYR HLEAVTTPAF QFLRMISPLS WMPVVVMLMG
VGDQPIYFLL AFAALWPILL NTAAGVRQLD PRWLQLSRSL SATRWETLCK VIVPGVIGHV
LTGVRLAIGI LWIVLVPCEM LGVSAGLGYF ILDTRDRLAY SELMAMVLLI GVLGFVLDAL
ARGLHRRWVH G