Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3589 |
Symbol | sdaC |
ID | 1046374 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4077912 |
End bp | 4079192 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637147003 |
Product | aromatic amino acid ABC transporter permease |
Protein accession | NP_745725 |
Protein GI | 26990300 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGAGC AGGCCCCAAG CGTTGAACAA CGCTTTGCAG AATCGACCCC CGCCGCCCTC GGCACCTGGG CGCGTCACGA CACCACCTGG ATGCTGGGCC TGTTCGGCAC AGCCATCGGC GCCGGGACAC TGTTCCTGCC GATCAACGCC GGCCTTGGCG GCTTCTGGCC GCTGCTGATC CTGGCCGTGC TGGCCTTTCC GATGACCTAT TTCGCCCATC GCGGGCTGAC CCGTTTCGTC CTTTCCGGGC GCGATGGCAG CGACATCACC GAAGTGGTCA AGGAGCATTT CGGCATCACC GCCGGTGCCT CGATCACCGT GCTGTACTTC TTCGCCATCT TCCCGATCCT GCTTATCTAC AGCGTGGCGC TGACCAACAC CGTGTCCAGC TTCATGGAGC ACCAGCTGCA CATGCAGCCG CCGCCACGGG CAATCCTGTC ATTCGTGCTG ATCCTCGGTC TGCTGGCCAT CGTGCGCTGC GGGGAGCAGG CCACGGTCAA GGTCATGAGC CTGCTGGTCT ACCCGTTCAT CGTCGCTCTG GCGTTGCTGG GCCTGTACCT GGTGCCGCAC TGGACCGGTG GCATTCTCGA CAGCGCCACA GAGGTGCCGC CGGCCTCGGC CTTCCTGCAC ACCCTGTGGC TGGCCATTCC GGTGATGGTG TTCTCGTTCA ACCATTCGCC GATCATCTCG GCCTTTGCCG TCGACCAGAA GCGCCGTTAC GGCGCGCACG CCGACGAGCG CAGCGGCCAG ATCCTGCGTC GTGCCCACCT GTTGATGGTG GTGATGGTGC TGTTCTTCGT GTTCAGCTGC GTGCTCACCC TGAGCAGCGC CCAGCTGGCC GAAGCCAAGG CGCAGAACCT GTCGATCCTG TCGTACCTGG CCAACCACTT CAGCAACCCG ACCATCGCGT TCGCTGCGCC GTTGATCGCC TTCGTGGCCA TCGCCAAGTC GTTCCTCGGC CACTACATCG GCGCCAGCGA AGGCCTGAAG GGCATCATCG CCAAGACCGG TGCGCGCCCA GGCGCCAAGG CCCTGGACCG CGTGGTTGCC GCACTGATGC TGGTGGTGTG CTGGATCGTC GCCACGCTCA ACCCGAGCAT TCTCGGCATG ATCGAGTCGC TCGGCGGCCC GATTCTCGCG GTGCTGTTGT TCCTGATGCC GATGTACGCC ATTCGCCGTG TGCCATCGAT GCGCAAGTAC AGCGGTGCGG CCTCCAACGT GTTCGTCGTT GTGGTCGGCC TGGTTGCGCT GACTTCCGTG GTGTACGGCC TTGTAAGCTG A
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Protein sequence | MNEQAPSVEQ RFAESTPAAL GTWARHDTTW MLGLFGTAIG AGTLFLPINA GLGGFWPLLI LAVLAFPMTY FAHRGLTRFV LSGRDGSDIT EVVKEHFGIT AGASITVLYF FAIFPILLIY SVALTNTVSS FMEHQLHMQP PPRAILSFVL ILGLLAIVRC GEQATVKVMS LLVYPFIVAL ALLGLYLVPH WTGGILDSAT EVPPASAFLH TLWLAIPVMV FSFNHSPIIS AFAVDQKRRY GAHADERSGQ ILRRAHLLMV VMVLFFVFSC VLTLSSAQLA EAKAQNLSIL SYLANHFSNP TIAFAAPLIA FVAIAKSFLG HYIGASEGLK GIIAKTGARP GAKALDRVVA ALMLVVCWIV ATLNPSILGM IESLGGPILA VLLFLMPMYA IRRVPSMRKY SGAASNVFVV VVGLVALTSV VYGLVS
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