| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3528 |
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| Symbol | |
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| ID | 1046302 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3999313 |
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| End bp | 4000299 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146943 |
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| Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
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| Protein accession | NP_745665 |
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| Protein GI | 26990240 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.32476 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCATGC CCAAACATGC CTTCTCCCCA TTACGCCGTC TGCTGATCGG CGGTTTACTG
GCCAGCGTCG CCAGCGCCCT GCTGCCCTGG TCCGAAGCCA TTGCCGACGA CGCCAGGACA
CTGCGCATCG GCTACCAGAA ATTCAACAGC ATCAACATCC TCAAAGGCAG CGGCGCCCTG
GAGAAGGCCC TGGCACCGCA AGGTGTGAAG GTCAGCTGGC ATGAGTTCGC CGCCGGCCCC
CAGCTACTGG AGGCATTGAG CACCGGCGCC ATCGACCTCG GCCACGCAGC CGATGCCCCC
TCGGTGTTCG CCCAGGCCGC AGGCAAGCCT GTGGTCTACC TGGCTGCCGA ACAACCCTAC
CCACGCGGCA TCGGCCTGGT CGTGCGCGAG CAGGACCACC TGGCCAGTGT GCAGGACCTG
AAAGGCAAGC GTGTGGCCAC GGGCCGCGGC TGGAATGCCC AGTACCTGCT GGCCGTAGCC
CTGCAGCAGG CTGGGCTCAG TTACAAGGAC ATTACCCCCG CATACGTCAA CAATGCCGCC
GATGCCGTGG CCGCCCTGCA ATCGGGCAGC GTGCAGGCCG TGACCCTTTG GGACCCGTTC
CTCGCCGCCG CAGAAAGCCA GCCAGGGCTG AAGAACCTGC GCGACGGCAG CGGCCTGTCC
AACAACCGCA CCTTCTACCT GTCCACAGCC AGCTTTGCCG ACCAGCACCG TGCTCTGCTG
AAAACCTTCT TTGCCGAGCT GGGCAAGGTC AGCCAGTGGG CCAACGCCAA GCCTGCCGAA
GTGGCCGCGC TGCTGGCACC GCAGCTGGGG ATCAGCACCC AGGTGCTGGA AGTGGCCAGC
GAACGGCGCA ACTACAACGC CGTCGCTATC ACCCCGCAGA TCGTTGCCGA ACAACAGAAG
CTGGCTGACA CCTTCCAGGG CCTGGGCCTG ATTCCACGCA AGCTACAGGT GGCCGAAGCG
GTCTACCCGG CCTCTGTGTT GCCTTGA
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| Protein sequence | MPMPKHAFSP LRRLLIGGLL ASVASALLPW SEAIADDART LRIGYQKFNS INILKGSGAL
EKALAPQGVK VSWHEFAAGP QLLEALSTGA IDLGHAADAP SVFAQAAGKP VVYLAAEQPY
PRGIGLVVRE QDHLASVQDL KGKRVATGRG WNAQYLLAVA LQQAGLSYKD ITPAYVNNAA
DAVAALQSGS VQAVTLWDPF LAAAESQPGL KNLRDGSGLS NNRTFYLSTA SFADQHRALL
KTFFAELGKV SQWANAKPAE VAALLAPQLG ISTQVLEVAS ERRNYNAVAI TPQIVAEQQK
LADTFQGLGL IPRKLQVAEA VYPASVLP
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