Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3522 |
Symbol | |
ID | 1046404 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3995382 |
End bp | 3995804 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146937 |
Product | endoribonuclease L-PSP |
Protein accession | NP_745659 |
Protein GI | 26990234 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0348507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.770379 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCCAT CAAGCGCATT CCAGCTAAGC AACCCCGAAG GCCTCTACGA CCCCAGTGGC AACGCCTACT CCCATGTCGC CGAAGTGCGC GCTGACAGCC GTCTGCTGTT CATCGCCGGT CAGGGTGGGG AGGATAGCCA GGGCCAGTTG TCACCTGTGT TCGCCGAACA GGCCCGGCAG GCGCTGGCCA ACCTGGAGCG GGCCCTGGCG TCGAAAGGTG CCAGCCTGGC CCAGGTGTTC AAGCTGACCC TGCTGATTGT CGAGCACTCC GAAGCGCGCC TGCACCAATG GGTGGCTGAG GCCGACAGGG CCTGGGGAGC GCACATGAAA CCGACCTGCA CGCTGATACC GGTGCCCCGG CTGGCACTGG ACGGCATGCT GGTGGAGATC GAAGCAGTAG CCGCCGTCTT GCTCAAAACC TGA
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Protein sequence | MTPSSAFQLS NPEGLYDPSG NAYSHVAEVR ADSRLLFIAG QGGEDSQGQL SPVFAEQARQ ALANLERALA SKGASLAQVF KLTLLIVEHS EARLHQWVAE ADRAWGAHMK PTCTLIPVPR LALDGMLVEI EAVAAVLLKT
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