Gene PP_3453 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3453 
Symbol 
ID1045599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3912774 
End bp3914075 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content65% 
IMG OID637146869 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionNP_745591 
Protein GI26990166 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.917862 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA TCCTGGTGCG GTTGTACCTG GTGATCATCG TCGCCTACGC CGGCGCGTTG 
CTGTTCATCC CTGACACCAT CGTCGGCCTG TTCCGCGACC GGTTCATGGC CTACAACCTG
GACCAGGCCA AGGGTGTACA AGCGTTGATC GTGCGCCAGT TCCGCCAGGC TCCGCGCGAG
CAGTGGCCAG CGGTGGAGCA GGAACTGGCC AGTGATTTCG CACCGCTGGA ACTGCAGCTG
CTGCGCAGGG ATCAGGCCGG TTTGAGCGAT GAGGAGCAGG CGCGCCTGGA GCAGGGTCTG
TACGCAGTGC GCATTGCCGA GTGGGGCTAT TACGAGACGG TGTTGGCGCC GCTGGACAAG
GAGTGGCTGA TACGCCTGCA TTCCCCGCCA GACCCGCTGG ACATCAACGT GCTGTCGTGG
GGCGTGACCG TGTTGATTGG TGCAGCCATG CTGGGTTGCC TGCTGCTGTG GGTTTGGCCG
CACTGGCGTG ATCTGGAGCG CCTCAAGGAG ACCGCTCGGC GCCTGGGCCA GGGGCAGATG
GCCGAGCGTA CGCACATTTC GCCTCACTCC AACATTGGTG AACTGGCCGG GGTATTCGAC
ACCATGGCCA GTGACCTGGA ACGCCATGTC AACCAGCAGC GTGAACTGCT CAATGCGGTA
TCGCACGAGT TACGCACGCC ACTGACCCGG CTGGACTTCG GCCTGGTGCT GCTGTTCGAC
GAAGTGCCGC CAGCCAGCCG CAAGCGCCTG CTGGAACTGG TCGGGCATGT GCGCGAGCTG
GATGAACTGG TGCTGGAGCT GCTGTCCTAT AGCCGGTTGT ACAACGCCGA CCAGGCGCGG
GAGCGGGTGG AGGTATCGCT GCTGGAGCTG GTCGACAGTG TGCTTGGGGG CTTTGCCGAG
GAACTCGATG GCCGGGGTAT CCAGTGGGAG GTGCGGGCCG AGGGTGAGTT GCCGCGCTTT
GTACTGGACC CGCGACTGAC GGCGCGCGCG GTGCAGAACC TGGTGCGCAA TGCCATGCGC
TATTGCGATG AAAGCCTGCT GCTGCGCTTG CGCCTGGAAG CCGATGGCGC CTGCCTGCTG
ACGGTGGAGG ATGACGGGAT TGGCGTCCCT GTGGAGGAGC GCGAGCGGGT TTTCCAGCCG
TTCTACCGTC TGGACCGCAG TCGCGATCGC AACACCGGTG GTTTTGGCCT GGGGTTGGCC
ATCAGCCGGC GGGCGATCGA GGGGCAGGGT GGCACCTTGA CCCTGGCGCA GTCGGCGCTG
GGTGGGGCGC AGTTCAGGAT TCGTTTGCCC GCCGGCGGAT AG
 
Protein sequence
MLKILVRLYL VIIVAYAGAL LFIPDTIVGL FRDRFMAYNL DQAKGVQALI VRQFRQAPRE 
QWPAVEQELA SDFAPLELQL LRRDQAGLSD EEQARLEQGL YAVRIAEWGY YETVLAPLDK
EWLIRLHSPP DPLDINVLSW GVTVLIGAAM LGCLLLWVWP HWRDLERLKE TARRLGQGQM
AERTHISPHS NIGELAGVFD TMASDLERHV NQQRELLNAV SHELRTPLTR LDFGLVLLFD
EVPPASRKRL LELVGHVREL DELVLELLSY SRLYNADQAR ERVEVSLLEL VDSVLGGFAE
ELDGRGIQWE VRAEGELPRF VLDPRLTARA VQNLVRNAMR YCDESLLLRL RLEADGACLL
TVEDDGIGVP VEERERVFQP FYRLDRSRDR NTGGFGLGLA ISRRAIEGQG GTLTLAQSAL
GGAQFRIRLP AGG