Gene PP_3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3396 
Symbol 
ID1046278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3846908 
End bp3848236 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content65% 
IMG OID637146814 
Producthypothetical protein 
Protein accessionNP_745536 
Protein GI26990111 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.378832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.49969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCGAC CGATACCCCA CCCGCTGGCA GTGGCGATTT TCGCCGGCAT GCTCCAGCTT 
CCCGCGCAAG CCGCCTTGAA CGCTGTCGAT CCAGGCGCTT ACGTCCCAGC CAATGGCGGC
TTCCCCGCCT GGTACCAGGA CAGCCACGGT CGTACCCTCG ACCTGTGCCT GACCAAGGCC
GTCAGCTCCC GGGTCGCAGG CGCACCTGGC GCACCCTCAT ACATGTGCAC GCTACTGCCC
ACACCTGGTG TGTTCGACGA TACCCAACCC ATCGTCTTCC CCACCAACTT CCCTGACGAA
GCGTTCTGGT TCACTGCCGA CGCTGCAATC GTCGACGCTG CGCGTGGCAT CGACCTCAGC
TATGGCACGG CGATCGAAGC GGCATTCGCT GCCGAAGAAC CTGTCGAGGG TGACCAGGTC
AGCTTCGCCC GGGTCCGTAT CCGGGTCGAC GTTCCCACCG CGGGCACCTA CGTGGTCACC
CACCCCTATG GTGTTGAAGT GTTCGATGTG CCCGTTGCAG GGCGCCGGGC GATCAACATG
ACCCGCGACA TCGGCATCGC CGGCGCAGGC GACTTCACCG GCGCACTCAA GGGCGATGTC
GGGCCGTTCC TGCGCAGTGT CAACGGCCCC TACACCGAAG GCAACGAGCG CTTCATTGGT
GACCCGAACC TGGAAGAACG GGTAACGGGC AGCCCATTCA ACACCAACTA CGTCCGCATC
GAAGGCCCTG GTGGCATCGA CCTGCGCACC GAGCTGTTCG CTGTCTCGGG CAAGCTTTCC
GAAGTGGCCC TGCCAACCCC GCTGATGCCA CAACGCAGCA CTTACTCACG CCATACCGAG
AACGGCGACC TGATCGCCCA GCAAGACATC TTCGTGTTGG CCCCGCCGCC ACCGGCAAGC
GTCACCCTGA CCAGCCAGAC CCCCAACCTG AGCCTCACTG AGGCCAACGG CACCGGCGCC
TGGTACGCCC AGTCAGCCCT CAACCCGGCG GCCGGAACCA TCGTGACACT GTCCGCTGAC
AACAGCGTGG CAATCCCGAC CAGCAGCCTG ACCACCAGCA ACGTTCCCCT GACCGACCTG
GTCACCATCA CGCAGGCCCA GTACCGCCTG TCCACCGGCG AGCTGACCCT GGTGGCCAGC
ACCAGTGACG AAACAACACC TCCAGTACTT ACCGCACATA CCGGCAACGG CACGCTGATC
GGCAACCTGG GCGGTACCGG CGCCGTGAAG ACGTTGAGCA TGACCCTCTC GCCCATTCCG
CCGGCCAAGG TGCAGGTCAC CAGCGCCAAC GGTGGTAGCG ACTCCGAAGA CGTGGTGCTG
GTGCCATGA
 
Protein sequence
MHRPIPHPLA VAIFAGMLQL PAQAALNAVD PGAYVPANGG FPAWYQDSHG RTLDLCLTKA 
VSSRVAGAPG APSYMCTLLP TPGVFDDTQP IVFPTNFPDE AFWFTADAAI VDAARGIDLS
YGTAIEAAFA AEEPVEGDQV SFARVRIRVD VPTAGTYVVT HPYGVEVFDV PVAGRRAINM
TRDIGIAGAG DFTGALKGDV GPFLRSVNGP YTEGNERFIG DPNLEERVTG SPFNTNYVRI
EGPGGIDLRT ELFAVSGKLS EVALPTPLMP QRSTYSRHTE NGDLIAQQDI FVLAPPPPAS
VTLTSQTPNL SLTEANGTGA WYAQSALNPA AGTIVTLSAD NSVAIPTSSL TTSNVPLTDL
VTITQAQYRL STGELTLVAS TSDETTPPVL TAHTGNGTLI GNLGGTGAVK TLSMTLSPIP
PAKVQVTSAN GGSDSEDVVL VP